Pairwise Alignments

Query, 280 a.a., ABC transporter amino acid-binding protein from Pseudomonas fluorescens FW300-N1B4

Subject, 270 a.a., amino acid ABC transporter, periplasmic amino acid-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 82.0 bits (201), Expect = 1e-20
 Identities = 61/203 (30%), Positives = 100/203 (49%), Gaps = 5/203 (2%)

Query: 8   VKRLLPAMLGALISLAASASAQADATLDKIQQRHVLTVGVVLSGGPFGSIDPGTQKPRGL 67
           +KRLL  +L   + L  +A+      LD+I+QR  L  GV  S  PFG ID  +++  G 
Sbjct: 1   MKRLL--LLALTLGLVLTAAVAHAGKLDEIKQRGTLVCGVKDSVVPFGFIDETSKQLVGF 58

Query: 68  NVDLAQELGRQLGAEVQLVPVLPANRVQFLQQGKVDLLIANMEWTAERGEILGFVPTPFY 127
           +VD+ Q +  + G ++++  V  A R+  L QG VDL+ A M    ER +++ F  T ++
Sbjct: 59  DVDICQFIADRAGVKLEVKTVTSATRIPMLTQGSVDLVAATMTHKFERDDVIDFSIT-YF 117

Query: 128 RVGGSAALLKDSKITRWEDLKGQPVCTSQGSSYIKPL--TELGVEIKAFKSSSESLLALR 185
             G    + K   I    DLKG+ V T +GS+  K +   +    + +F    ++ LAL+
Sbjct: 118 DAGQRLLVKKGGGIKSAADLKGKKVATVKGSTSEKNMKAAQPDCVVVSFDEYPQAFLALK 177

Query: 186 GNNCVAAVHDATLINPLITDNAE 208
                A   D  ++  L   + E
Sbjct: 178 QGKAEAVTTDEPILVGLKNSDPE 200