Pairwise Alignments

Query, 201 a.a., two-component response regulator from Pseudomonas fluorescens FW300-N1B4

Subject, 202 a.a., DNA-binding response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  133 bits (334), Expect = 2e-36
 Identities = 72/189 (38%), Positives = 117/189 (61%), Gaps = 4/189 (2%)

Query: 2   VFVVDDDASMRNALSNLLRSAGIQVETFASTAEFLQQPKTEGASCLILDVRLQGNSGLEF 61
           +++VDDD ++ ++L  +LR  G QV+TF+S  +FL Q     A C+ILD R+   +G E 
Sbjct: 7   LYLVDDDEAILDSLGFMLRQFGYQVQTFSSGRDFLAQCPLTQAGCVILDSRMPEITGQEV 66

Query: 62  QSQLAKSNASIPIVFITGHGDIEMSVKAMKAGAVDFLAKPFREQDLLDAVSAALQADVKR 121
           Q +L ++ + + ++F+TGHGD+ M++ A + GA DF  KP   + L+ A+  A +    +
Sbjct: 67  QQKLLETQSPLGVIFLTGHGDLPMALSAFRKGACDFFQKPVSGKALVQAIKKAHKE--SQ 124

Query: 122 RQFEQQFSDLHAHYQTLTAREKEVMALAVKGLMNKQIAGQMNLSEITVKIHRGHAMKKMH 181
             FEQQ   L   +  LT RE++V+A  V+G+ NKQI+  M LS  T+++HR   MKK+ 
Sbjct: 125 ASFEQQ--SLQHKFAQLTDREQQVLAHVVQGMTNKQISEAMYLSLRTIEVHRAKIMKKLE 182

Query: 182 AKSFADLVR 190
             + A+LV+
Sbjct: 183 VSNMAELVQ 191