Pairwise Alignments

Query, 321 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N1B4

Subject, 298 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  140 bits (352), Expect = 5e-38
 Identities = 87/289 (30%), Positives = 146/289 (50%), Gaps = 7/289 (2%)

Query: 16  LRRADINLLIVFETVMCERNVTRAAEKLFLCQATISSALGRLRSMFNDPLFIRTGRVMEP 75
           L+  D+NL +VF+ +  ERN+TRAAE+L + Q  +S+AL RLR+  NDPLFIRT + M P
Sbjct: 3   LQNVDLNLFVVFDAIYTERNLTRAAERLCITQPAVSNALSRLRTSLNDPLFIRTPKAMMP 62

Query: 76  TARAEEIHARLTPALDGIAVALSCAQAFDPLTSDETFHIGLSDDVEYALLPRLIKHLRDE 135
           T  AE +  ++  AL  ++ ++    +FDPL ++  F +G+ D  E  +LP L+  L+  
Sbjct: 63  TPVAENMIGQVREALKLLSSSMHLGDSFDPLLAEHHFQLGMFDVTEETMLPSLLAALQVH 122

Query: 136 APNITLVVRRVDHRQLPQLLTSGEISVGISF-AQELPASAHCKSLRAMQPMLLRADSDP- 193
           AP +++    V   ++ +   SG + + I       P   H   +      L+R D    
Sbjct: 123 APRLSISSYPVSREEMLKEFVSGRLDLAIDAPIVTHPDLYHHPLVTVPYVCLVRKDHPEV 182

Query: 194 -GALELDDFCRRPHVVVSSMGNVIDDADHALSLVGRQRRVVLAVPQFSALPALLAGSDMI 252
              L L+ +    HV VSS    +   D AL+ +G+ R + +      A P L+A +++ 
Sbjct: 183 GDTLSLEQYLALSHVHVSSRRQGVGYVDAALNRLGKHRNIQVRTKHHQAAPKLVAETNLA 242

Query: 253 AIVPDYVARAMARMEGMRADFAPLALPAPDLSMAWRGAAHNDPRERWLR 301
             VP+    ++A+   ++    P  +   +  + W  +A  D   RWLR
Sbjct: 243 TTVPE----SLAKNTDLKVLKLPFEVEPIEWHLYWHRSADQDNANRWLR 287