Pairwise Alignments

Query, 531 a.a., FIG01074225: hypothetical protein from Pseudomonas fluorescens FW300-N1B4

Subject, 538 a.a., EmrB/QacA family drug resistance transporter (RefSeq) from Shewanella loihica PV-4

 Score =  186 bits (473), Expect = 1e-51
 Identities = 123/501 (24%), Positives = 238/501 (47%), Gaps = 10/501 (1%)

Query: 18  VLLMAGIVLATLTEAIASTVLSLGRSDIIGDTYATPDEFAWLDIGYIALKLIGFMTAPWL 77
           V + AG+ L      +   + +    +I G   AT +E +W+   Y+  ++I    + WL
Sbjct: 38  VAVFAGL-LGAFMAILDIQITNASMKEIQGSLGATLEEGSWIATAYLVAEMIAIPLSGWL 96

Query: 78  MNRFAARHVIISSTLVMGLACGIAAITARLDLLVALRVIQGFAGGTLLVGGQAIIFRSFP 137
               + R  ++ +T    LA  + ++   L+ ++A R +QGF GG L+     +I    P
Sbjct: 97  SQGLSVRRYLLWTTAAFILASFLCSLAWNLEAMIAFRALQGFFGGALIPLAFRLILELLP 156

Query: 138 RSHQPILQALFAMGSVVAPATLAPALQGWLIDSQSWAWIFFSVVPIALAASGLVLIADGP 197
           +  +    ALF + +  AP+ + P L GWL +  SW ++F+  +P  L    + ++A G 
Sbjct: 157 KEKRATGMALFGVTATFAPS-IGPTLGGWLTEQFSWHYLFYINIPPGLLV--MAMLAYGL 213

Query: 198 MPAKV---RQRPFDWIGFSLISTTLLCFTYVLSQGSRWDWFEEPRILWLTVIGAAALLAF 254
               +   + +  D+ G   ++  + C   VL +G+R DWF    I  L ++ A  +  F
Sbjct: 214 RAQAIDWDKLKNADYSGIVTMALGMGCLEVVLEEGNRKDWFGSELIQNLAIVAAINIALF 273

Query: 255 LGQQVLAKGQGLLDFSLFKTSDFSFAFIVSFVAGAALFGSAFLIPAFALSVLGFTPTDAG 314
           +  Q L K   L++  L    DF+ + +  F+ G ALF + ++IP +   +  ++P + G
Sbjct: 274 VFIQ-LRKSSPLVNLRLLGQRDFALSTLAYFLLGMALFSAIYMIPLYLSQIHDYSPLEIG 332

Query: 315 QLLLPSGAFFVGALLISAYLMQAHRVAPFATVPFGILMIMVAMWMLSGSTSESGADDMMA 374
           ++++  G  F   L++        R        FG  M  ++ +M S  T +   + M+A
Sbjct: 333 EVIMWMG--FPQLLVLPLVPRLLQRFDGRYLAAFGFSMFALSYYMNSHMTLDFAGEQMIA 390

Query: 375 AILLRGLGLGFLFLSITLIAFSHLNSRNLAGGIGLFNTGRQLGGLIGVAGLQTLIDHNVV 434
           A ++R LG  F+ + I +IA  H++++       + N  R LGG  G+A + TLID+   
Sbjct: 391 AQVVRALGQPFILVPIGIIATMHISAQQTPSASTVLNVIRNLGGAFGIALVATLIDNQSR 450

Query: 435 TNAVVLGANVTPGGAALIERMTNTTAMLAVKGMDAAAAGRAATSLLGRLVTSQSTVIAFD 494
           T+   +   V        + +  T+ +    G D   A   A ++L + +T Q+ + A++
Sbjct: 451 THLADMKQTVAAVSGQAYQYLQQTSQLFVQAGSDPVTAQAQAKAMLAKTMTQQAYIQAYN 510

Query: 495 TAFVAVALLFVIAAPILVGIK 515
             F+ +++L ++A   ++ I+
Sbjct: 511 DVFLIISVLLMLAVVAVLMIR 531