Pairwise Alignments

Query, 531 a.a., FIG01074225: hypothetical protein from Pseudomonas fluorescens FW300-N1B4

Subject, 539 a.a., drug resistance transporter, EmrB/QacA family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  183 bits (465), Expect = 1e-50
 Identities = 130/520 (25%), Positives = 245/520 (47%), Gaps = 20/520 (3%)

Query: 2   STIASATRSNASATTGVLLMAGIVLATLTEAIASTVLSLGRSDIIGDTYATPDEFAWLDI 61
           +T+++ +     +    + + G ++      +   + +    +I G   AT +E +W+  
Sbjct: 16  ATVSAPSAYERGSRHSWIAVFGGLIGAFMAILDIQITNASMKEIQGSLGATLEEGSWIST 75

Query: 62  GYIALKLIGFMTAPWLMNRFAARHVIISSTLVMGLACGIAAITARLDLLVALRVIQGFAG 121
            Y+  ++I    + WL    + R  ++ +T     A  + +I+  L+ ++A R +QGF G
Sbjct: 76  AYLVAEMIAIPLSGWLSTGLSVRRYLLWTTAAFIFASILCSISWNLESMIAFRALQGFFG 135

Query: 122 GTLLVGGQAIIFRSFPRSHQPILQALFAMGSVVAPATLAPALQGWLIDSQSWAWIFFSVV 181
           G L+     +I    P + + +  ALF + +  AP ++ P L GWL +  SW ++F+  V
Sbjct: 136 GALIPLAFRLILEFLPENKRAVGMALFGVTATFAP-SIGPTLGGWLTEHFSWHYLFYINV 194

Query: 182 PIALAASGLVLIADGPMPAKVRQRPFDW--------IGFSLISTTLLCFTYVLSQGSRWD 233
           P  L    + ++A G     + +RP  W         G   ++  + C   VL +G+R D
Sbjct: 195 PPGLLV--MAMLAYG-----LEKRPVVWDKLKNADLAGIVTMALGMGCLEVVLEEGNRKD 247

Query: 234 WFEEPRILWLTVIGAAALLAFLGQQVLAKGQGLLDFSLFKTSDFSFAFIVSFVAGAALFG 293
           WF    I  L +I A  L+ F+  Q L +   L++  L    DF  + +  F+ G ALFG
Sbjct: 248 WFGSDLIRNLAIIAAVNLVLFVWIQ-LNRKDPLVNLRLLGKRDFVLSTVAYFLLGMALFG 306

Query: 294 SAFLIPAFALSVLGFTPTDAGQLLLPSGAFFVGALLISAYLMQAHRVAPFATVPFGILMI 353
           + +LIP +   V  +TP + G++++  G   +  L +   LMQ  R        FG  M 
Sbjct: 307 AIYLIPLYLSQVHDYTPLEIGEVIMWMGFPQLLVLPLVPRLMQ--RFDGRYLAAFGFFMF 364

Query: 354 MVAMWMLSGSTSESGADDMMAAILLRGLGLGFLFLSITLIAFSHLNSRNLAGGIGLFNTG 413
            ++ +M S  T++     M+A+ ++R LG  F+ + I ++A +HL          + N  
Sbjct: 365 ALSYYMNSQMTADYAGQQMIASQVVRALGQPFILVPIGMLATAHLKPHENPSASTVLNVM 424

Query: 414 RQLGGLIGVAGLQTLIDHNVVTNAVVLGANVTPGGAALIERMTNTTAMLAVKGMDAAAAG 473
           R LGG  G+A + TL D+   ++   +  ++    A   + +  + ++L + G D   A 
Sbjct: 425 RNLGGAFGIALVATLTDNLSRSHLAHVKESLPAVSAQAQDYLNQSASLLQMGGSDPYTAA 484

Query: 474 RAATSLLGRLVTSQSTVIAF-DTAFVAVALLFVIAAPILV 512
             A +LL + ++ Q+ + A+ D  F+  ALL +    +L+
Sbjct: 485 AQAKALLAKTMSQQAYIQAYNDVFFIMGALLLIAVVAVLL 524