Pairwise Alignments

Query, 400 a.a., Membrane fusion component of tripartite multidrug resistance system from Pseudomonas fluorescens FW300-N1B4

Subject, 397 a.a., HlyD family efflux transporter periplasmic adaptor subunit from Rhodanobacter denitrificans FW104-10B01

 Score =  461 bits (1187), Expect = e-134
 Identities = 241/389 (61%), Positives = 296/389 (76%), Gaps = 3/389 (0%)

Query: 6   TSQAPDNAQDTSNLRKRKVMLFALTIVVILAGLGVWGYQEFY-GRWNESTDDAYVNGNVV 64
           T+  P      +    R  +L  L +VV+LA +G W    F  GRW E TDDAYVNGNVV
Sbjct: 7   TAPGPAPLAPPARKNPRGPLLRLLAVVVLLAVIG-WALWYFLDGRWYEGTDDAYVNGNVV 65

Query: 65  EITPLVTGTVVSIGADDGDLVHEGQVLVNFDPNDAEVGLQSAQANLARTVRQVRGLYSNV 124
           +ITP V GTVVSIGADDGD VH G VLV  DP+DA+V L  A+ANLA TVR+VRGLYS+V
Sbjct: 66  QITPQVPGTVVSIGADDGDRVHAGDVLVRLDPSDADVALAEAKANLANTVRKVRGLYSSV 125

Query: 125 DGMKAQVNAQQAEVQKAQDNFNRRKNLAAGGAISQEELSHARDDLTSAQNALANAKQQLM 184
            G +A V A+Q  V KA+ +++RR  LA  GAIS EEL+HA D LTSA++AL  A+QQ  
Sbjct: 126 SGARADVAARQTAVDKARADYHRRVALAKSGAISAEELAHASDALTSAESALTAAQQQYQ 185

Query: 185 TTSALVDDTVVSSHPDVMSAAAQLRQAYLTHARSTLIAPVTGYVAKRSVQLGQRVQPGTA 244
           T+  LVDDTVV+SHPDV +A+A+LR A+L   R+TLIAPV GYVAKRSVQ+GQRVQPG A
Sbjct: 186 TSKVLVDDTVVASHPDVQAASARLRAAFLDDVRATLIAPVDGYVAKRSVQVGQRVQPGAA 245

Query: 245 LMAVIPLDQLWIDANFKETQLRDMRIGQPVDIEADLYGSDVKYSGTIDSLGAGTGSAFAL 304
           LMAV+PL  +W+DANFKETQL DMRIGQPV I +D+YG  V+Y G + SLG GTGSAF+L
Sbjct: 246 LMAVVPLHGVWVDANFKETQLTDMRIGQPVTIRSDVYGGAVEYKGKVQSLGVGTGSAFSL 305

Query: 305 LPAQNATGNWIKIVQRVPVRIHI-NAEELARHPLRVGLSTQVDVNLRDQSGPVLAQQSPQ 363
           LPAQNATGNWIKIVQR+PVRI   +  +L +HPLR+G+S  VDV+L D+SGP+L+Q+SP 
Sbjct: 306 LPAQNATGNWIKIVQRIPVRIVFDDPAQLDQHPLRIGMSLDVDVSLHDRSGPMLSQRSPS 365

Query: 364 KASFSTSIYDRQLAEADAMITQLIHDNSA 392
           K +FST +Y +QLA+ADA ITQ++H N A
Sbjct: 366 KPAFSTDVYRQQLAKADAAITQIVHANMA 394