Pairwise Alignments

Query, 234 a.a., FIG033889: YebC paralog in Betaproteobacteria from Pseudomonas fluorescens FW300-N1B4

Subject, 248 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  140 bits (352), Expect = 3e-38
 Identities = 85/232 (36%), Positives = 136/232 (58%), Gaps = 7/232 (3%)

Query: 3   AQW-KVKHKEAAANAK-GKIFGKLVKEITIAARNG-ADTTTNAHLRLVVEQAKKASMPRE 59
           ++W  +KH++AA +AK GK+F K ++E+T+AAR G +D  +N  LR  +++A   +M R+
Sbjct: 5   SKWANIKHRKAAQDAKRGKLFTKFIRELTVAAREGGSDPDSNPRLRAAIDKALSNNMTRD 64

Query: 60  TLERAIKKGSGQLGETVQYHRVTYEGFAPHQVPLIVECVTDNINRTVAEIRVAFRK--GQ 117
           T+ERAIK+G+G+L   V    + YEG+ P    ++VE +TDN NRTV+ +R AF K  G 
Sbjct: 65  TVERAIKRGAGELDGQV-LETIMYEGYGPGGTAVMVETMTDNRNRTVSGVRNAFSKSGGN 123

Query: 118 LGASGSVAWDFNHVGMIEASPDSPDADPEMAAIEAGAQDFEPGEDGATLFLTEPADLDAV 177
           LG  GSVA+ F   G+I  +  S +     AA++AGA+D    +D +    T P     V
Sbjct: 124 LGTDGSVAYLFEKRGVISYAEGSDEDTIMDAALDAGAEDVVTNDDTSIDVYTTPEAFGTV 183

Query: 178 QKALPEQGFTVLSAKLGYQPKNPVSGLSDEQMAEVEAFLEGLDNHDDVQDMF 229
           + AL   G   ++A++   P      L  E   +    ++ L++HDDVQ+++
Sbjct: 184 KDALDAAGLDAVNAEVTMVPSTKAE-LDAETAPKFLRLIDNLEDHDDVQEVY 234