Pairwise Alignments

Query, 234 a.a., FIG033889: YebC paralog in Betaproteobacteria from Pseudomonas fluorescens FW300-N1B4

Subject, 248 a.a., conserved hypothetical protein TIGR01033 (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  146 bits (369), Expect = 3e-40
 Identities = 88/232 (37%), Positives = 139/232 (59%), Gaps = 7/232 (3%)

Query: 3   AQW-KVKHKEAAANAK-GKIFGKLVKEITIAARNG-ADTTTNAHLRLVVEQAKKASMPRE 59
           ++W  +KH++AA +AK GK+F K ++E+T++AR G +D  +N  LR+ +++A   +M R+
Sbjct: 5   SKWANIKHRKAAQDAKRGKLFTKFIRELTVSAREGGSDPDSNPRLRIAIDKALGGNMTRD 64

Query: 60  TLERAIKKGSGQLGETVQYHRVTYEGFAPHQVPLIVECVTDNINRTVAEIRVAFRK--GQ 117
           T+ERAIK+G+G+L E  Q   + YEG+ P    ++VE +TDN NRTV+ +R AF K  G 
Sbjct: 65  TIERAIKRGAGEL-EGQQLETIIYEGYGPGGTAVMVETMTDNRNRTVSGVRNAFSKSGGN 123

Query: 118 LGASGSVAWDFNHVGMIEASPDSPDADPEMAAIEAGAQDFEPGEDGATLFLTEPADLDAV 177
           LG  GSVA+ F   G++  +P + +     AA+EAGA+D    +DGA    TEP     V
Sbjct: 124 LGTDGSVAYLFTKRGVLSYAPGTDEDALMDAALEAGAEDVVSYDDGAIDVFTEPTAFYEV 183

Query: 178 QKALPEQGFTVLSAKLGYQPKNPVSGLSDEQMAEVEAFLEGLDNHDDVQDMF 229
           + AL   GF   +A++          L  E   +    ++ L+ HDDVQ+++
Sbjct: 184 KDALDAAGFVSDNAEIAMIASTKAE-LDAETAEKFMRLIDTLEEHDDVQEVY 234