Pairwise Alignments

Query, 299 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N1B4

Subject, 299 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score = 71.2 bits (173), Expect = 3e-17
 Identities = 75/285 (26%), Positives = 127/285 (44%), Gaps = 23/285 (8%)

Query: 4   YRQLHYFWVVAKTGSIVRACEQLNLTPQTISGQISLLEQTYGIELFRRVGRQLELTEAGR 63
           Y  +  F  V + GS   A  +L +    +S +IS LEQ  G++L +R  R+L LT+AGR
Sbjct: 4   YANIPLFVSVVELGSFSEAARRLGINKSAVSKRISALEQALGVKLIQRTTRRLHLTDAGR 63

Query: 64  QTLPYAEQMFQLGGELELMLRAQPNEQQILFRVGVADVVPKSIVYRLIAPTM-ELSEPLR 122
           Q   Y  Q   L  + +  L +Q    Q   +V + +V  +    R IAP + E S    
Sbjct: 64  QYYEYVHQAAALMQQAQDALASQQGAVQGSLKVSLPNVFGQ----RHIAPLLSEFSRQYP 119

Query: 123 ITCREDKLERLLADLAIQRLDLVISDSPMPSHLDIKGYSQKLGECGISFFATAELAARYG 182
               E  L+  + DL  + LD+V+    +P   D    + KL  C     A+ +  A   
Sbjct: 120 TINLEVSLDDRVVDLLKEGLDMVVRIGDLP---DSSLVAVKLAPCHSLLCASPDYLAH-- 174

Query: 183 QDFPRSLHGAPLLIPGPETVVRSRLQ---RWFAEQ-----QIQPQIVGEFDDSALMQAFG 234
           Q  PRSL      + G   +  S  +    W  E+     +I+P+   + ++S +++   
Sbjct: 175 QSHPRSLAD----LRGHNCLFYSYFRGGLEWSFERRGEVSRIKPRGNIKVNNSEVIRRLL 230

Query: 235 QSGSGIFIGPS-VIADEVKRQCGVELIGQTDAVSESFYAISVERK 278
             G GI + P  ++ +E+     V ++    A +   YA++ ER+
Sbjct: 231 LDGMGIALMPRYLVEEELAAGTLVPVLSDYQAPTHGIYALTPERQ 275