Pairwise Alignments

Query, 232 a.a., Lipoprotein releasing system ATP-binding protein LolD from Pseudomonas fluorescens FW300-N1B4

Subject, 253 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  199 bits (507), Expect = 3e-56
 Identities = 104/224 (46%), Positives = 145/224 (64%), Gaps = 2/224 (0%)

Query: 6   MSDKAILSCRNLGKSYVEGPESVEVLAGLQLELHPGERVAIVGTSGSGKSTLLNLLGGLD 65
           +S  + ++  NL KS      S+ +L G+ L++  GE VAI+G SGSGKSTLL LL  LD
Sbjct: 5   VSKNSAINVVNLEKSVTTQEGSLTILKGINLDVKQGESVAILGPSGSGKSTLLGLLAALD 64

Query: 66  TPTKGSVWLAGEELSALNEKARGLLRNRSLGFVYQFHHLLPEFTALENVCMPLLIGKTAI 125
           TPT G +WL GE LS LNE+ +  LR + + F++Q   L+   TALENV +P  +    +
Sbjct: 65  TPTAGEIWLDGEALSPLNEEQKAALRKQKVSFIFQSFMLVDTLTALENVMLPAELA--GV 122

Query: 126 PEARQRATALLERVGLGHRLEHKPAELSGGERQRVAIARALVNKPGLVMLDEPTGNLDSH 185
             A+++A A+L RVGL HRL H P +LSGGE+QRVAIARA + +P ++  DEPTGNLDS 
Sbjct: 123 KNAKEKAEAMLGRVGLSHRLTHLPKQLSGGEQQRVAIARAFICEPKVLFADEPTGNLDSV 182

Query: 186 TAQGIQDLMLELSTSMRTAFLVVTHDMNLARQMDRVLHLQEGYL 229
               I D++ EL+    T  ++VTHD+ LA++  R L +  G+L
Sbjct: 183 NGHKIADMLFELNQENHTTLILVTHDLQLAKRCQRQLVMDNGHL 226