Pairwise Alignments

Query, 394 a.a., Lipoprotein releasing system transmembrane protein LolC from Pseudomonas fluorescens FW300-N1B4

Subject, 411 a.a., lipoprotein releasing system, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  250 bits (639), Expect = 5e-71
 Identities = 150/399 (37%), Positives = 228/399 (57%), Gaps = 13/399 (3%)

Query: 1   VSFISLTSMIGLALGVVVMIVVLSVMNGFDHEMRTRVLGMVPHATIESGEPIS--DWQSL 58
           +S IS  S+IG+ LGV  +IVVL VMNGF  ++R ++LG   H  + S +P +  D   L
Sbjct: 21  ISVISAMSIIGVGLGVASLIVVLGVMNGFTTDLRDKILGANAHVIVMSSKPAAMRDVGEL 80

Query: 59  AAKVKQNPQVAAVAPFVQMQGLLTNNGKVSKVLLNAIDPVQERQVSIIDNFMQQGKLDDL 118
             +V+    V    PF+  + +L+    V  ++L  IDP     V  I + M +G L DL
Sbjct: 81  MGRVQDVRGVKGATPFIYSETMLSTPHGVKGLVLRGIDPQTAPGVLSILSRMTRGGLRDL 140

Query: 119 APG---SFGIVIGDKAAAKLGVAVGDKLTFVAPEVTVTPAGMFPRMKRFTVVGIFHVGAG 175
             G   + GI+IG + A +LG+  G ++  ++P+   T  G  PR++ F V GIF  G  
Sbjct: 141 PAGPDGAHGIIIGQELANRLGITTGSRVNLLSPDGQKTTTGFAPRIRPFRVAGIFTTGMY 200

Query: 176 EIDGYLGITNLQDLAKLHRWQPDQVQGLRLKFDDLFQAPRMAWTIAQQLGEDTYYARDWT 235
           E D  LG   L     +      QV G+ +  DD+++A  +   + +  G   YY R+W 
Sbjct: 201 EYDSSLGFVTLDAARDILGLPEGQVSGIEVVVDDVYKADVIGEDVLKASGGYPYYVRNWM 260

Query: 236 RTHGNLYQAIRMEKAMIGLLLLLIVAVAAFNIISTLVMVVNDKKGDIAILRTLGSTPGQI 295
             + NL+ A+++EK  + ++L LIV V +F+I++TLVM+V +K  DIAIL ++G+T   +
Sbjct: 261 EMNANLFAALKLEKTAMFVILALIVLVGSFSIVTTLVMLVMEKTRDIAILMSMGATRSMV 320

Query: 296 MAIFMVQGTVIGVVGTLIGAVVGIFAALNVSAAISALEGLIGHKFLNADVYFIDYLPSQV 355
             IFM+QGT+IG +GT +G V+G    L+VS A+   + +     L   VY ID+LP  +
Sbjct: 321 RRIFMLQGTIIGAIGTALGYVLG----LSVSWALQRYQFI----KLPQGVYSIDHLPVLL 372

Query: 356 QSQDVLMVCAAALVLSFLATLYPAWRAARTQPAEALRYE 394
           Q  D+  V  AA++L FLAT+YPA +AA  +P EALRYE
Sbjct: 373 QWSDLAAVGGAAMLLCFLATIYPARQAAALEPVEALRYE 411