Pairwise Alignments

Query, 235 a.a., Predicted transcriptional regulator for fatty acid degradation FadQ, TetR family from Pseudomonas fluorescens FW300-N1B4

Subject, 212 a.a., TetR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  188 bits (478), Expect = 6e-53
 Identities = 99/204 (48%), Positives = 136/204 (66%), Gaps = 2/204 (0%)

Query: 3   QSETVERILDAAEQLFAEKGFAETSLRLITSKAGVNLAAVNYHFGSKKALIQAVFSRFLG 62
           +S+T  RILDAAE+LFAE+GF+ETSLRLITSKA VNLA+VNYHFGSKK LI+AV +R+L 
Sbjct: 4   RSDTKTRILDAAEKLFAERGFSETSLRLITSKAEVNLASVNYHFGSKKELIRAVLARYLD 63

Query: 63  PFCLSLDKELERRQAKPENKPTLEELLEILVEQALVVQPRSGNDLSIFMRLLGLAFSQSQ 122
            F       +   Q K  ++P+L E+   LV+  L +     +    F++LLG  + +SQ
Sbjct: 64  RFMPEASDAVV--QLKQASEPSLNEIFSSLVKPLLELNKFKADGTRTFLQLLGRGYIESQ 121

Query: 123 GHLRRYLEDMYGKVFRRYMMLVNEAAPRIPPIELFWRVHFMLGAAAFSMSGIKALRAIAE 182
           GHLR ++   YG+    ++  V E+AP IPP E+FWR+HF LG   F+M+   AL  IAE
Sbjct: 122 GHLRWFITTHYGEHLSEFVKAVAESAPHIPPAEMFWRLHFTLGTVVFTMASADALTEIAE 181

Query: 183 TDFGVNTSIEQVMRLMVPFLAAGM 206
            DF  +  IE V+R ++P+LAAG+
Sbjct: 182 ADFNEHNDIEAVIRKVIPYLAAGV 205