Pairwise Alignments

Query, 327 a.a., Cytochrome c oxidase subunit CcoP (EC 1.9.3.1) from Pseudomonas fluorescens FW300-N1B4

Subject, 289 a.a., cytochrome c oxidase subunit 3 from Phaeobacter inhibens DSM 17395

 Score =  171 bits (433), Expect = 2e-47
 Identities = 107/309 (34%), Positives = 157/309 (50%), Gaps = 37/309 (11%)

Query: 27  TRKGQRSESTDETVGHSFDGIEEYDNPLPKWWFMLFVGTIIFALGYLVLYPGLGNWKGLL 86
           ++K ++ E    T GHS+DGIEE+DNP+P+WW   F  TII+A+GY V YP    W G+ 
Sbjct: 2   SKKVKKFEDDPNTTGHSWDGIEEFDNPMPRWWLWTFYATIIWAIGYTVAYPA---WPGI- 57

Query: 87  PGYNYLDNEKQTAFANGQTGWTGVHEWEKEMLRSDAKFGPIFAKFASMPIEEVAKDPQ-- 144
                     Q+A A G  GW       +E+   +    PI ++   + +  +  DP+  
Sbjct: 58  ----------QSATA-GVLGWNSRALVAEEIAAVNEANAPINSRLEEIELASITTDPELN 106

Query: 145 --ALKMGGRLFASNCSVCHGSDAKGAYGFPNLTDADWRWGGDAQTIKTTIMGG------- 195
             A+  G  +F + C+ CHG+ A GA G+PNL D DW WGG  + I  TI  G       
Sbjct: 107 GYAVSAGSAVFKTWCAQCHGAGAAGAKGYPNLLDDDWLWGGSMEDIHATIAHGIRNEESD 166

Query: 196 --RHAVMPAWA--AVIGEQGVSDVAAYVLTNLDGRKLPEGAKADPVA-GQKLFAANCVAC 250
             R++ MPA+    ++ ++ +  V  YV+ +L G    E   AD VA G  +FA NC +C
Sbjct: 167 DARYSEMPAFGRDELLEKEEIDQVVNYVM-SLSG----EPQDADKVAPGAAIFADNCASC 221

Query: 251 HGPAGKGTPAMGAPDLTHPAAFIYGSSFAQLQQTIRYGRQGQMPAQEQLQGNDKVHLLAA 310
           H   G G  + GAP+L   A ++YG   A L +T+   R G MP         ++  + A
Sbjct: 222 HMEDGTGDRSQGAPNLA-DAIWLYGGDHATLTETVYNSRYGVMPNWNARLTEAQIRAVTA 280

Query: 311 YVYSLSHGE 319
           YV+ L  GE
Sbjct: 281 YVHQLGGGE 289