Pairwise Alignments

Query, 327 a.a., Cytochrome c oxidase subunit CcoP (EC 1.9.3.1) from Pseudomonas fluorescens FW300-N1B4

Subject, 323 a.a., cytochrome c oxidase, cbb3-type, subunit III (RefSeq) from Shewanella loihica PV-4

 Score =  271 bits (694), Expect = 1e-77
 Identities = 147/327 (44%), Positives = 203/327 (62%), Gaps = 16/327 (4%)

Query: 1   MTTFWSLYVTVLSLGTIFALTWLLLSTRKGQRSESTDETVGHSFDGIEEYDNPLPKWWFM 60
           M++FWS+++TVL++  I     LL    K        +++GHSFDGIEE +NPLPKWW  
Sbjct: 2   MSSFWSIWITVLTIVVIAGCFILLFVVSKNTTGVEEGKSMGHSFDGIEEINNPLPKWWSY 61

Query: 61  LFVGTIIFALGYLVLYPGLGNWKGLLPGYNYLDNEKQTAFANGQTGWTGV------HEW- 113
           +F  TIIF + YL  YPGLGN+KG L G++  +    T     +     V      H W 
Sbjct: 62  MFYITIIFGVVYLAAYPGLGNYKGFL-GWSSSNQSIGTEKGIKEDSAAAVELAANEHRWV 120

Query: 114 --EKEMLRSDAKFGPIFAKFASMPIEEVAKDPQALKMGGRLFASNCSVCHGSDAKGAYGF 171
             ++E+ +++AK+ PIFA + + P+EE+ K+ +ALK+GGRLF  NC+ CHGSDA+G+ GF
Sbjct: 121 QYDQEVEKANAKYSPIFAAYLATPLEELVKNEEALKVGGRLFLQNCAQCHGSDARGSKGF 180

Query: 172 PNLTDADWRWGGDAQTIKTTIMGGRHAVMPAWAAV-IGEQGVSDVAAYVLTNLDGRKLPE 230
           PNLTD DW +GGD  TIKTTIM GR+ +MP    + I +  +  +A YV+  L GR   E
Sbjct: 181 PNLTDGDWLYGGDLATIKTTIMNGRNGMMPPKGGLPIEDSELKGLAEYVV-KLSGRDHDE 239

Query: 231 GAKADPVAGQKLFAANCVACHGPAGKGTPAMGAPDLTHPAAFIYGSSFAQLQQTIRYGRQ 290
              A    GQ  F   C ACHG  G G   MGAP+LT    ++YG S   +Q++I+ GR 
Sbjct: 240 ALAAQ---GQASFMKGCFACHGMDGTGNKFMGAPNLT-DNTWLYGGSRGVIQESIKNGRS 295

Query: 291 GQMPAQEQLQGNDKVHLLAAYVYSLSH 317
           G MPA + + G +KVH++AAYVYSLS+
Sbjct: 296 GVMPAWKDVLGEEKVHVIAAYVYSLSN 322