Pairwise Alignments

Query, 327 a.a., Cytochrome c oxidase subunit CcoP (EC 1.9.3.1) from Pseudomonas fluorescens FW300-N1B4

Subject, 296 a.a., cytochrome c oxidase, cbb3-type, subunit III from Marinobacter adhaerens HP15

 Score =  318 bits (816), Expect = 8e-92
 Identities = 156/320 (48%), Positives = 218/320 (68%), Gaps = 27/320 (8%)

Query: 1   MTTFWSLYVTVLSLGTIFALTWLLLSTRKGQRSES-TDETVGHSFDGIEEYDNPLPKWWF 59
           M+TFWS++++V++LGT+F   WLL +TRK Q S++ TD T+GHSFDGIEEYDNPLPKWWF
Sbjct: 1   MSTFWSIWISVITLGTVFGCWWLLWATRKSQTSDTETDRTMGHSFDGIEEYDNPLPKWWF 60

Query: 60  MLFVGTIIFALGYLVLYPGLGNWKGLLPGYNYLDNEKQTAFANGQTGWTGVHEWEKEMLR 119
            LF+ T +FALGYL LYPGLG++KGLL                   GWT  ++WE E+  
Sbjct: 61  YLFLATCVFALGYLALYPGLGSFKGLL-------------------GWTSTNQWEAEVAE 101

Query: 120 SDAKFGPIFAKFASMPIEEVAKDPQALKMGGRLFASNCSVCHGSDAKGAYGFPNLTDADW 179
           ++ K+GPI+A++   P+ E+A++  A+K+G RLFA+NC+VCHGS A+G  GFPNLTD DW
Sbjct: 102 AEEKYGPIYAQYGQTPVPELAENSDAMKIGQRLFANNCAVCHGSAARGQVGFPNLTDDDW 161

Query: 180 RWGGDAQTIKTTIMGGRHAVMPAWAAV--IGEQGVSDVAAYVLTNLDGRKLPEGAKADPV 237
            +GG  + I +T+  GR   MPA   +  +  + V  V  YVL+     K  + AK    
Sbjct: 162 LYGGTPEAILSTLHNGRMGAMPAMGTMPNMTSEQVDQVVNYVLSFSGREKDADAAK---- 217

Query: 238 AGQKLFAANCVACHGPAGKGTPAMGAPDLTHPAAFIYGSSFAQLQQTIRYGRQGQMPAQE 297
           AG+++FA  CVACHG  GKG  A+GAP+LT    ++YGS++  +++T+  GRQ  MPAQ+
Sbjct: 218 AGEQVFAQACVACHGADGKGNQAIGAPNLT-DNTWLYGSTYEWIKETVVNGRQNMMPAQD 276

Query: 298 QLQGNDKVHLLAAYVYSLSH 317
           +L   D++ +LAAYVYSLS+
Sbjct: 277 RLLSGDQIQILAAYVYSLSN 296



 Score = 54.7 bits (130), Expect = 3e-12
 Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 5/88 (5%)

Query: 239 GQKLFAANCVACHGPAGKGTPAMGAPDLTHPAAFIYGSSFAQLQQTIRYGRQGQMPAQEQ 298
           GQ+LFA NC  CHG A +G   +G P+LT    ++YG +   +  T+  GR G MPA   
Sbjct: 131 GQRLFANNCAVCHGSAARGQ--VGFPNLTDDD-WLYGGTPEAILSTLHNGRMGAMPAMGT 187

Query: 299 LQG--NDKVHLLAAYVYSLSHGEKAPEA 324
           +    +++V  +  YV S S  EK  +A
Sbjct: 188 MPNMTSEQVDQVVNYVLSFSGREKDADA 215