Pairwise Alignments

Query, 1162 a.a., Chromosome partition protein smc from Pseudomonas fluorescens FW300-N1B4

Subject, 1151 a.a., putative chromosome segregation protein SMC from Phaeobacter inhibens DSM 17395

 Score =  441 bits (1135), Expect = e-127
 Identities = 368/1213 (30%), Positives = 581/1213 (47%), Gaps = 116/1213 (9%)

Query: 1    VRLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES 60
            +R   ++L GFKSFVDPT +     +  VVGPNGCGKSN+++A+RWVMGE+  K +RG  
Sbjct: 1    MRFSKLRLNGFKSFVDPTDLLIADGLTGVVGPNGCGKSNLLEALRWVMGENRPKAMRGGG 60

Query: 61   MTDVIFNGSTSRKPVSQASIELVFDNSDGTLLGEWAAYAEISIRRKVTRDSQTTYYLNGA 120
            M DVIF G++SR   + A + L  DNS+      +     + I R++TRD  + Y  NG 
Sbjct: 61   MEDVIFAGTSSRPARNFAEVSLQIDNSERLAPSGFNESDNLEILRRITRDVGSAYKTNGK 120

Query: 121  KCRRRDITDIFLGTGLGPRSYSIIEQGMISKLIESKPEDLRNFIEEAAGISKYKERRRET 180
              R RD+  +F     G  S +++ QG I++LI +KP+  R  +EEAAGIS   +RR E 
Sbjct: 121  DVRARDVQMLFADASTGAHSPALVRQGQIAELINAKPKARRRILEEAAGISGLYQRRHEA 180

Query: 181  ENRIRRTHENLARLTDLREELERQLERLHRQAEAAKKYQEYKGEERQLKAQLSALRWQAL 240
            E +++ T +NL R+ D+ E+L  QL +L RQA  A++Y++   + R+ +  L   RW+  
Sbjct: 181  ELKLKNTEQNLLRVDDVIEQLAAQLSQLARQARHAQRYRDIGEQLRRAEGMLLYRRWREA 240

Query: 241  NEQVGQRESIIGTQE---ITFEALV----AEQRNADAAIERLRDGHHDLSERFNLVQGRF 293
            ++   + E I+ T+E      EAL      ++  A++A+  LR+     +     +  + 
Sbjct: 241  DDARLEAEDILRTRETQAAKAEALARVADGKRLEAESALPPLREEEAIAAAVLQRLFVQR 300

Query: 294  YSVGGDIARVEQSIQHGQQRLRQLQDDLKEAERARLETESHLGHDRTLLLTLGEELDMLT 353
             ++    A+  Q+I+    R+ QL  D        +E ES L  D       GE ++ L 
Sbjct: 301  DALSDQEAQARQTIETLTNRVAQLGRD--------IERESGLNRD------AGETIERLD 346

Query: 354  PEQEVTSAAA-------EEAAAALEESETTMHGWQEQW-----DTFNLTAAEPRRQAEVQ 401
             EQ   + AA        EAA    E+ + +   +E       D   L A     Q +V+
Sbjct: 347  WEQRELARAAIGHDDRMAEAAERSREAGSVLQAREEHLTSLTEDVARLAARHQSAQRQVE 406

Query: 402  QSRIQQLETSLERLADRQKRLGEERALLSADPE-DAAIMELSEQLAASEATLEDLQASEE 460
              R   L    E  A R   +     L  A+   +AAI    E  AA+E   E L A++E
Sbjct: 407  DCRRGLLRAEEEGGASRDAMVEAGDTLAQAEAAFEAAIEAEEEARAAAELADEALAAADE 466

Query: 461  AQVERLEQLRQELQQALSAQQQAQGDLQRLNGRLASLEALQQAALDPGTGTAEWLREQHL 520
            A+       +    +A + + +A+G+L  L   + +L  L                E+  
Sbjct: 467  AR----NDTQSREAEARARRSEAEGELGALRAEVTALAKLV---------------ERDT 507

Query: 521  ADRPRLAEGLKVEAGWELAVETVLGADLQAVLVDDFGDFDLAGFAQGDLRLLSPATDGVR 580
            A+   + + ++V AG+E A+   L  DL+A L +  G          D     PA     
Sbjct: 508  AEGGHVLDEMRVAAGYEKALGAALADDLRAPLAEVDGPSGWVTLPPYDGDAPLPAG---A 564

Query: 581  MPGSLLDKVEAQIDLSPWLGQVKPVDSLEQALALRGQLAAGQSLISRDG---YWVGRHFL 637
            +P SL   V +   L   + QV  VD+ + A  L  +L  GQ L++ +G    W G    
Sbjct: 565  VPLSL--HVSSPDALHRRISQVGLVDA-DAARDLHSRLMPGQRLVTLEGDLWRWDGFR-- 619

Query: 638  RVRRASEAESGVLARGQEIQRLGLEREERE----------ATVETLETRLQNLRAQQRQQ 687
                A +A S    R +++ RL + +++ E          A  E L  +L  +    +  
Sbjct: 620  --AWAEDAPSAAALRLEQMNRLEVLKQDMEHVGARADGAKAAHEVLMRKLAEVTTADQTA 677

Query: 688  ENGREHLRRLLQDEARQQGELKAQLSAGKAKVEQLTLRRTRLDEEL----TELSEQRALE 743
               R    + + D AR     ++  +  + K+E L++   R DE+       L+E  A  
Sbjct: 678  RQARRVADQRVADAARALSRAESHRNLSEGKLETLSIAVARHDEDAAAAQAHLTEAEAAV 737

Query: 744  H--ENIGEARLQLQEALDSMALDTEQRELLLAQRDSLRERLDRVRQEARQHKDHAHQLAV 801
               E++ EAR ++++     A++  +  +L     + R   D +R+E         Q+  
Sbjct: 738  EGLEDLAEARAKVEDI--KQAVEAARITML-----THRSTQDELRREGEARTARGQQVTK 790

Query: 802  RLGSLKAQHDSTRQALERLEMQSERLTEKREQLSLNLEEG-EAPL------EELRLKLEE 854
             L          R  LE  + +   LTE+R      L+E  + P       EEL L +EE
Sbjct: 791  DL-------SGWRHRLESADRRIAELTERRAATEEELQEAHQVPAEIAETHEELNLAIEE 843

Query: 855  LLDKRMTVDEELKTAQMAMEDADRELRDAEKRRTQAEQQSQLIRSQLEQQRMEWQALTVR 914
               ++    + L  A+  + DA +  R+  +  ++A +      ++ +  R E       
Sbjct: 844  AEARKAVASDALIGAETVLRDAVQNERECARLASEAREARARSEARCDAAR-EAVGHAEA 902

Query: 915  RKTLQDQLLEDGYDLNGVLATLLAGANEKDAEEELERIAARIQR----LGAINLAAIDEY 970
            R   + Q + D      +LA+L A   +    EELE    R +R    LGA+NL A ++ 
Sbjct: 903  RIREEQQTVPD-----ALLASLDATPEDMPNAEELEAEVNRHKRQRDALGAVNLRAEEDA 957

Query: 971  QQQSERKRYLDAQNDDLVEALDTLENVIRKIDKETRNRFKDTFDQINGGLQALFPKVFGG 1030
            +   +    L  +  DL EA+ TL + I  +++E R R    F+++N     LF  +FGG
Sbjct: 958  RTVQDEHDQLVREKADLEEAVKTLRSGIASLNREGRERLLTAFEEVNASFTMLFTHLFGG 1017

Query: 1031 GRAYLELT-GEDLLDTGVTIMAQPPGKKNSTIHLLSGGEKALTALALVFAIFKLNPAPFC 1089
            G A L +   +D LD G+ IM QPPGKK ST+ LLSGGE+ LTA+AL+FA+F  NPAP C
Sbjct: 1018 GEANLVMVESDDPLDAGLEIMCQPPGKKLSTLSLLSGGEQTLTAMALIFAVFLSNPAPIC 1077

Query: 1090 MLDEVDAPLDDANVGRYARLVKEMSQ--TVQFIYITHNKIAMEMADQLMGVTMHEPGCSR 1147
            +LDEVDAPLDDANV R+  L+ EM +    +F+ ITH+ + M   D+L GVTM E G S+
Sbjct: 1078 VLDEVDAPLDDANVTRFCDLLDEMCRQTDTRFLIITHHAVTMARMDRLFGVTMQEKGVSQ 1137

Query: 1148 LVAVDVEEAMAMV 1160
            LV+VD+++A A+V
Sbjct: 1138 LVSVDLKKAEALV 1150