Pairwise Alignments

Query, 178 a.a., FIG008443: hypothetical protein from Pseudomonas fluorescens FW300-N1B4

Subject, 308 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score = 45.4 bits (106), Expect = 9e-10
 Identities = 46/169 (27%), Positives = 66/169 (39%), Gaps = 18/169 (10%)

Query: 8   TFLCLFGLPGFAAAGEKTVYGLNEYASLDGINLEVAAKLDTGAKTASLSARDI------- 60
           T + LF L   A   +K V G     ++D   L   A++DTGA   SL A D+       
Sbjct: 25  TLVALFLLAP-AYGDDKAVIGQTAMMTVDEAGLVYQARIDTGAGNTSLHAFDLEIQGGSA 83

Query: 61  KRFKRNGESWVRFYLAIDAAHSHPIERPLARVSKIKRRAGDYDPEEGKKYTARPVIELDI 120
           K+   N    + F     A     +   + + S +    G            R ++E+ +
Sbjct: 84  KKMADNVGKTIWFTTENVAGERKRLSAKIVKTSTVSNSQGT---------ETRYMVEMHV 134

Query: 121 CMGSALRSIEVNLTDRSAFQYPLLIGSEALKRFDALVDPSLKYAAGKPA 169
                 R ++VNL DR    Y LLIG   LK    +VD S K   G  A
Sbjct: 135 GFAGETRKVKVNLRDRGHMDYKLLIGRNWLKG-KYVVDVSEKRVIGARA 182



 Score = 32.7 bits (73), Expect = 6e-06
 Identities = 33/135 (24%), Positives = 53/135 (39%), Gaps = 15/135 (11%)

Query: 23  EKTVYGLNEYASLDGINLEVAAKLDTGAKTASLSARDIK------RFKRNGESWVRFYLA 76
           EK V G     S+    L    ++DTGA   SL A D+K        ++N    + F   
Sbjct: 174 EKRVIGARAPISILETGLLFDTRIDTGAVENSLHAVDLKVENGVEDMEQNVGKMLAFTTE 233

Query: 77  IDAAHSHPIERPLARVSKIKRRAGDYDPEEGKKYTARPVIELDICMGSALRSIEVNLTDR 136
            +   +  +   +   S I+   G            R ++EL++        ++VNL DR
Sbjct: 234 NEKGETKRVHARIVETSLIRNAQGS---------EVRYMVELNVGEPGREYKVKVNLRDR 284

Query: 137 SAFQYPLLIGSEALK 151
           +     LLIG   L+
Sbjct: 285 TKMTNKLLIGRNWLQ 299