Pairwise Alignments

Query, 401 a.a., 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) from Pseudomonas fluorescens FW300-N1B4

Subject, 387 a.a., fatty oxidation complex, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  263 bits (672), Expect = 6e-75
 Identities = 158/412 (38%), Positives = 233/412 (56%), Gaps = 36/412 (8%)

Query: 1   MTQALIFDALRTPRGKGKANGALHSVKPVNLVAGLLTALQQRT-SLDTSQVDDVVLGCVT 59
           M QA+I D +RTP G+ KA G   +V+   L A L+  L  R   LD + ++DV+ GCV 
Sbjct: 1   MKQAVIVDCIRTPMGRSKA-GVFRNVRAETLSAELMKGLLLRNPQLDPNTIEDVIWGCVQ 59

Query: 60  PIGDQGSDIAKTATQVADWDVSVAGMQLNRFCASGLEAVNLGAMKVRSGFEDLVVVGGVE 119
              +QG +IA+ A+ +A    +   + +NR C S +EA++  A  + +G  D  ++GGVE
Sbjct: 60  QTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIIGGVE 119

Query: 120 SMSRVPMGSDGGAWALDPETNLHNHFTP----QGVGADLIATIEGFSRQDVDAFALHSQQ 175
            M  VPM        +D    L N+        G+ A+++  + G +R+  DAFA+ S Q
Sbjct: 120 HMGHVPMNH-----GVDFHPGLANNVAKASGMMGLTAEMLGKLHGITREQQDAFAVRSHQ 174

Query: 176 KAARARANGSFNKSLVPVQDQNG---IILLDHDEFIRADSTMEGLGKLKPSFEMIGQMGF 232
           +A  A   G F K +  ++  +    +I +  DE IR ++TME L  L+P F+ +     
Sbjct: 175 RAYAATIEGRFAKEIYGIEGHDATGALIKVLQDEVIRPETTMESLAVLRPVFDPV----- 229

Query: 233 DATALRVYSQVERINHVHTPGNSSGIVDGAALMLIGSEAKGRALGLQPRARIVATAVTST 292
                         N   T G SS + DGA+ MLI  E+K RALGL  RARI + AV   
Sbjct: 230 --------------NGTVTAGTSSALSDGASAMLIMEESKARALGLPIRARIRSMAVAGC 275

Query: 293 DPTIMLTGPAPATRKALAKAGLRVEDIDLFEVNEAFASVVLKFIKDMA---IDPDKVNVN 349
           D  IM  GP PAT+KALA+AG+ V D+D+ E+NEAFA+  L  +KD+    +  +K+N+N
Sbjct: 276 DAAIMGYGPVPATQKALARAGITVNDLDVIELNEAFAAQSLPCVKDLGLLDVVDEKINLN 335

Query: 350 GGSIAMGHPLGATGCAILGTLLDELEARRLRYGLATLCVGGGMGIATIIERL 401
           GG+IA+GHPLG +G  I  TL++ +E +    GLAT+C+G G GIAT+ ER+
Sbjct: 336 GGAIALGHPLGCSGARISTTLINLMEHKDATLGLATMCIGLGQGIATVFERV 387