Pairwise Alignments

Query, 302 a.a., Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p from Pseudomonas fluorescens FW300-N1B4

Subject, 280 a.a., HemK family modification methylase (RefSeq) from Shewanella loihica PV-4

 Score =  108 bits (269), Expect = 2e-28
 Identities = 78/253 (30%), Positives = 130/253 (51%), Gaps = 10/253 (3%)

Query: 7   RTLRDHIRWAVSRFHGEDLFFGHGTDNAWDEARQLVLGALHLPWEIADSYLDCNLEEDEL 66
           +TL   + WA +R   +D+     +D+A  +A  ++L  +H       ++ D  L  +++
Sbjct: 3   QTLAQALEWASTRL--QDV-----SDSAKLDAEVMLLHIIHKQRSYLYTWPDERLTSEQV 55

Query: 67  VNLQRLLKRRIEERIPTAYLLGEAWFCGMSFIVDERVLIPRSPIGELIEKRFEPWLGAEP 126
              ++++ RR E   P A+++GE  F  + F+V+   LIPR     L+E      L AE 
Sbjct: 56  TEYKQMVGRR-ELGTPIAHIVGEREFWSLPFMVNPTTLIPRPDTEILVETALNLPL-AEN 113

Query: 127 ARILDLCTGSGCIGIACAYEFQNAEVVLADLSFEALEVANQNIERHGVDERVFTVQGDGF 186
           A++LDL TG+G I ++ A+E  N ++   D   EA+ +A  N +   + + V  +Q D F
Sbjct: 114 AKVLDLGTGTGAIALSLAFERSNWQITAVDKVLEAVALAKANRDNLKLPQ-VEVLQSDWF 172

Query: 187 DGLPGQRFDLIVSNPPYVDAEDFADMPDEYQHEPELGLACGDDGLNLVRRMLAEAADHLT 246
           D +    F+LIVSNPPY+D ED      + + EP   L  G+ G   +  +   A D+L 
Sbjct: 173 DAINRYDFNLIVSNPPYIDEEDEHLSQGDVRFEPHSALTAGEHGYADLFYIAEAARDYLA 232

Query: 247 EKGLLIVEVGNSQ 259
             G L++E G  Q
Sbjct: 233 PGGYLLLEHGFGQ 245