Pairwise Alignments

Query, 302 a.a., Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p from Pseudomonas fluorescens FW300-N1B4

Subject, 314 a.a., N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase (RefSeq) from Shewanella loihica PV-4

 Score =  352 bits (902), Expect = e-102
 Identities = 173/298 (58%), Positives = 218/298 (73%), Gaps = 2/298 (0%)

Query: 4   SRLRTLRDHIRWAVSRFHGEDLFFGHGTDNAWDEARQLVLGALHLPWEIADSYLDCNLEE 63
           + LRT+ D +RWAVSRF+  ++++GHGTDNAWDEA  LV  ALHLP EI    +  NL  
Sbjct: 11  TELRTIGDMLRWAVSRFNDANIYYGHGTDNAWDEAIALVFHALHLPEEIGQQVIHSNLTS 70

Query: 64  DELVNLQRLLKRRIEERIPTAYLLGEAWFCGMSFIVDERVLIPRSPIGELIEKRFEPWLG 123
            E   +  L+ RR+ ER+P  YL   A+F G+ F VD+RVL+PRSPI E+I  RF PWL 
Sbjct: 71  SEKHKIVELIIRRVRERLPVPYLTNRAFFAGLEFYVDDRVLVPRSPIAEMIANRFSPWLY 130

Query: 124 AEPA-RILDLCTGSGCIGIACAYEFQNAEVVLADLSFEALEVANQNIERHGVDERVFTVQ 182
            +P  RILDLCTGS CI IACAYEF++AEV   D+S +ALEVA  NIE  GV +RVF ++
Sbjct: 131 NKPVNRILDLCTGSACIAIACAYEFEDAEVDAIDISSDALEVAQINIESLGVMDRVFPIE 190

Query: 183 GDGFDGLP-GQRFDLIVSNPPYVDAEDFADMPDEYQHEPELGLACGDDGLNLVRRMLAEA 241
            D F  +P G ++DLIVSNPPYVDAED  DMP+EY HEPELGLA G DGL+L +R+LA A
Sbjct: 191 SDMFAAIPKGPQYDLIVSNPPYVDAEDIGDMPEEYHHEPELGLASGRDGLDLTKRILANA 250

Query: 242 ADHLTEKGLLIVEVGNSQVHVEALYPEVDFAWLEFERGGHGVFMLTAEQCRDHQALFA 299
           AD+LT+ GLL+VEVGNS VH+   +PEV F W+ FE GG GVF+LT +Q  ++++LFA
Sbjct: 251 ADYLTQDGLLVVEVGNSMVHLMEQFPEVPFTWVNFEHGGDGVFVLTRDQLVENESLFA 308