Pairwise Alignments

Query, 211 a.a., Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) from Pseudomonas fluorescens FW300-N1B4

Subject, 245 a.a., RNA pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

 Score =  160 bits (405), Expect = 2e-44
 Identities = 87/194 (44%), Positives = 122/194 (62%), Gaps = 1/194 (0%)

Query: 6   IRIIHQDAAVLVVNKPTLLLSVPGRADDNKDCLITRLQENGYPEARIVHRLDWETSGIIL 65
           I +I++D  ++  NKP+ LLSVPGR  ++ D +  RL +   P+ ++VHRLD  TSG+IL
Sbjct: 14  IDVIYEDEHIIAANKPSGLLSVPGRPVEHYDSMWARLVDY-CPDVKVVHRLDMSTSGLIL 72

Query: 66  LARDPDTHRELSRQFHDRETEKAYTALCWGQPELDSGSIDLPLRYDPPTKPRHVVDHEFG 125
            A+       L +QF  R T K Y A  WG  E + G ++LPL  D P +P+  V  E G
Sbjct: 73  FAKGKHMESALKKQFQYRLTHKIYYARVWGVMEQNEGEVNLPLCCDWPNRPKQKVCFEEG 132

Query: 126 KHALTFWRVLERCGDWCRVELTPITGRSHQLRVHMLSIGHPLLGDGLYAHEQALAAWPRL 185
           + +LT ++V++R      V L PITGRSHQLRVHM S+GHP++GD LYA  +A+    RL
Sbjct: 133 RDSLTRYQVVKREEKTTVVRLIPITGRSHQLRVHMQSLGHPIVGDDLYAPPEAVEFADRL 192

Query: 186 CLHASMLSFTHPQT 199
            LHA+ L F HP++
Sbjct: 193 QLHAAELCFYHPRS 206