Pairwise Alignments

Query, 211 a.a., Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) from Pseudomonas fluorescens FW300-N1B4

Subject, 343 a.a., ribosomal large subunit pseudouridine synthase from Sinorhizobium meliloti 1021

 Score =  124 bits (310), Expect = 3e-33
 Identities = 89/238 (37%), Positives = 121/238 (50%), Gaps = 36/238 (15%)

Query: 8   IIHQDAAVLVVNKPTLLLSVPGRADDNKDCLITRLQEN---------GYPEARIVHRLDW 58
           ++++DA ++V+ KP  L+  PG A +    L+  L  +         G     IVHRLD 
Sbjct: 92  VLYEDADLIVLVKPAGLVVHPG-AGNWTGTLVNALIHHCGDSLSGIGGVKRPGIVHRLDK 150

Query: 59  ETSGIILLARDPDTHRELSRQFHDR----ETEKAYTALCWGQPELDSGSIDLPLRYDPPT 114
           +TSG++++A++   HR LS QF D       E+AY A+ WG+P    G ID PL      
Sbjct: 151 DTSGVMVVAKNDAAHRHLSDQFADHGRNGPLERAYRAVVWGRPRQLKGKIDAPLGRAGDR 210

Query: 115 KPRHVV--DHEFGKHALTFWRVLERCGDW-------CRVELTPITGRSHQLRVHMLSIGH 165
             R V   D +  + A+T + V+ER  +          VE    TGR+HQ+RVHM  IGH
Sbjct: 211 TKRAVKREDSDDAREAITHYEVVERYHEKPDGTSLASTVECHLETGRTHQIRVHMAHIGH 270

Query: 166 PLLGDGLYA----------HEQALAA---WPRLCLHASMLSFTHPQTGERLRFECPAP 210
           PL+GD  Y            E A AA   +PR  LHA ML F HP TGE + FE P P
Sbjct: 271 PLIGDPDYGAAFRTKANLLPEPARAAVNRFPRQALHAFMLQFEHPATGETMHFETPVP 328