Pairwise Alignments

Query, 211 a.a., Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) from Pseudomonas fluorescens FW300-N1B4

Subject, 224 a.a., pseudouridylate synthase (RefSeq) from Shewanella amazonensis SB2B

 Score =  171 bits (434), Expect = 7e-48
 Identities = 103/217 (47%), Positives = 127/217 (58%), Gaps = 9/217 (4%)

Query: 1   MPLSNIRIIHQDAAVLVVNKPTLLLSVPGRADDNKDCLITRLQENGYPEARIVHRLDWET 60
           +P  +IR I +D  ++++NKP+ LLS PG A    D  ITRL    YPEA +VHRLD  T
Sbjct: 11  VPWLDIRYIDRD--LIIINKPSGLLSNPGMAAHTHDSAITRLCRL-YPEAILVHRLDCAT 67

Query: 61  SGIILLARDPDTHRELSRQFHDRETEKAYTALCWGQPELDSGSIDLPLRYDPPTKPRHVV 120
           SGI++ AR       L  QF +R+TEK Y A   G  E D G+IDLPL  D    P   V
Sbjct: 68  SGIMVFARSKKAESNLKTQFQNRDTEKRYLAQVAGIIEQDEGTIDLPLGKDRSNPPWQKV 127

Query: 121 DHEFGKHALTFWRVLERCGDWCRVELTPITGRSHQLRVHMLSIGHPLLGDGLYAHEQALA 180
           D   G+ A+T +RVL R  +   V L P TGR+HQLRVHMLS+GHP+LGD  Y   Q   
Sbjct: 128 DMAEGRPAVTHYRVLARRENSTLVALEPETGRTHQLRVHMLSLGHPILGDDFYGRTQEFG 187

Query: 181 ------AWPRLCLHASMLSFTHPQTGERLRFECPAPF 211
                 A PRLCLHA  LSF HP + + + F   APF
Sbjct: 188 QGTVEEASPRLCLHAERLSFKHPWSNKPMTFVSRAPF 224