Pairwise Alignments

Query, 211 a.a., Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) from Pseudomonas fluorescens FW300-N1B4

Subject, 343 a.a., Pseudouridine synthase, RluD (NCBI) from Rhodospirillum rubrum S1H

 Score =  122 bits (307), Expect = 6e-33
 Identities = 77/225 (34%), Positives = 113/225 (50%), Gaps = 20/225 (8%)

Query: 6   IRIIHQDAAVLVVNKPTLLLSVPGRADDNKDCLITRLQE--------NGYPEARIVHRLD 57
           + ++++D  ++V++K   ++  PG  + +   +   L           G     IVHRLD
Sbjct: 102 LTVVYEDDDLIVIDKAAGMVVHPGPGNPDHTLVNALLAHCGPSLSGIGGERRPGIVHRLD 161

Query: 58  WETSGIILLARDPDTHRELSRQFHDRETEKAYTALCWGQPELDSGSIDLPLRYDPPTKPR 117
            +TSG+++ A+    H  L+ QF      + Y  L WG+P   +GSID PL   P  + +
Sbjct: 162 KDTSGLMIAAKTDLAHHGLAEQFACHSLTREYLCLVWGRPRPAAGSIDAPLGRHPTQRKK 221

Query: 118 HVVDHEFGKHALTFWRVL-ERCGDWCRVELTPITGRSHQLRVHMLSIGHPLLGDGLYAH- 175
             V    GK ALT +RV+ +  G    V+ T  TGR+HQ+RVHM  IGHPLLGD +Y H 
Sbjct: 222 MAVVSRGGKRALTHYRVVGDVEGIASIVKCTLSTGRTHQVRVHMAHIGHPLLGDAVYGHR 281

Query: 176 ----------EQALAAWPRLCLHASMLSFTHPQTGERLRFECPAP 210
                      + +A   R  LH+  L F HP+TGE L F    P
Sbjct: 282 NIPKKLPGDLSERIARLTRQALHSFHLGFLHPRTGESLEFLSELP 326