Pairwise Alignments

Query, 211 a.a., Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) from Pseudomonas fluorescens FW300-N1B4

Subject, 223 a.a., pseudouridine synthase (RefSeq) from Shewanella sp. ANA-3

 Score =  181 bits (459), Expect = 9e-51
 Identities = 98/205 (47%), Positives = 127/205 (61%), Gaps = 4/205 (1%)

Query: 10  HQDAAVLVVNKPTLLLSVPGRADDNKDCLITRLQENGYPEARIVHRLDWETSGIILLARD 69
           +QD  ++++NKP+ LLS PGRA    DC +TRLQ   YP+  +VHRLD  TSGI++ AR+
Sbjct: 18  YQDRDLIIINKPSGLLSNPGRAAHTFDCALTRLQRL-YPDTILVHRLDCATSGIMVFARN 76

Query: 70  PDTHRELSRQFHDRETEKAYTALCWGQPELDSGSIDLPLRYDP---PTKPRHVVDHEFGK 126
                +L  QF DR+ EK Y A   G    D+G IDL +  DP   P +          K
Sbjct: 77  KKAESQLKTQFQDRQNEKVYIAEVMGGIAKDAGIIDLAIAPDPEHPPYQKTQTPGTAGAK 136

Query: 127 HALTFWRVLERCGDWCRVELTPITGRSHQLRVHMLSIGHPLLGDGLYAHEQALAAWPRLC 186
            ALT +RVLER  +   VELTP TGR+HQLRVHML++GHP+LGD  Y  ++ + A PRLC
Sbjct: 137 SALTHYRVLERRENSTLVELTPQTGRTHQLRVHMLALGHPILGDEFYGDDEVIKARPRLC 196

Query: 187 LHASMLSFTHPQTGERLRFECPAPF 211
           LHA  L FTHP +G+ + F    PF
Sbjct: 197 LHAQSLRFTHPYSGKAMHFYSKHPF 221