Pairwise Alignments

Query, 297 a.a., Flagellar motor rotation protein MotB from Pseudomonas fluorescens FW300-N1B4

Subject, 312 a.a., flagellar motor protein MotB (RefSeq) from Shewanella amazonensis SB2B

 Score = 82.4 bits (202), Expect = 1e-20
 Identities = 75/281 (26%), Positives = 125/281 (44%), Gaps = 52/281 (18%)

Query: 16  WLVSYADFITLLFAFFVVMYSISSINEGKYKVISEALIGVFTDSDRA-LKPIPIGDE--- 71
           WL ++AD ++LL  FFV++ + S ++  K+K I+ ++   F   ++  +K IP G     
Sbjct: 16  WLATFADLMSLLMCFFVLLLAFSEMDVMKFKQIAGSMKYAFGVQNKVEVKDIPKGTSVIA 75

Query: 72  ---RPKTVTPA-------------KPLV--KDSEQIDAGIAQ-------------AANDP 100
              RP    P              +P++  ++ E   AG  Q              A + 
Sbjct: 76  LEFRPGKPEPTPIEIINQQTNEMTEPILDFQEGESESAGGVQQQQGSQRGGEASSTAQET 135

Query: 101 LKSIADDISAAFGDLISSN--QMTVRGNELWVE-------------IELNSSLLFGSGDA 145
            +S   D S++  +LI+    +M  + NE  V+             I +     FGSG  
Sbjct: 136 AESTQSDSSSS-QELINQQVKKMAEQLNEEIVDGAIEIESLGQQIIIRIREKGAFGSGSG 194

Query: 146 MPSDIAFNIIDKVAAILRPFDNPIHVEGFTDDQPIRTAQYPTNWELSSARSASIV-RMLA 204
                   +I  V  +L+     I V G+TDD  I    Y +NW+LSS R+ S+   ++ 
Sbjct: 195 FLQPRFRPVIRAVGELLKDVPGIITVSGYTDDMQISNELYSSNWDLSSKRAVSVAHELVK 254

Query: 205 MQGVNPGRLASVGYGEFQPVANNATAEGRARNRRVVLVVSR 245
           ++G +  R+  VG G   P+  N +AE RARNRRV + + +
Sbjct: 255 VKGFDSSRMKVVGMGSNNPLVPNESAENRARNRRVEIAIEQ 295