Pairwise Alignments

Query, 297 a.a., Flagellar motor rotation protein MotB from Pseudomonas fluorescens FW300-N1B4

Subject, 314 a.a., flagellar motor protein MotB (RefSeq) from Shewanella loihica PV-4

 Score = 71.6 bits (174), Expect = 2e-17
 Identities = 66/289 (22%), Positives = 118/289 (40%), Gaps = 63/289 (21%)

Query: 16  WLVSYADFITLLFAFFVVMYSISSINEGKYKVISEALIGVFTDSDRAL------------ 63
           WL ++AD ++LL  FFV++ + S ++  K+K I+ ++   F   ++              
Sbjct: 17  WLATFADLMSLLMCFFVLLLAFSEMDVMKFKQIAGSMKYAFGVQNKVEVKDIPKGTSVIA 76

Query: 64  --------KPIPIGDERPKTVTPAKPLVK------------------------------- 84
                   +P PI     +T    +P ++                               
Sbjct: 77  LEFRPGKPEPTPIEIINQQTNEMTEPTIEVQAGEDDSAGGVQQQRGEQRGGEASSTAQEE 136

Query: 85  -DSE------QIDAGIAQAANDPLKSIADDISAAFGDLISSNQMTVRGNELWVEIELNSS 137
            DSE      Q +A      ND +K +A +++    D   + ++   G ++ + I    +
Sbjct: 137 ADSEAQAKQQQQEAASQDQINDRVKKMAQELNKEIVD--GAIEIESLGQQIIIRIREKGA 194

Query: 138 LLFGSGDAMPSDIAFNIIDKVAAILRPFDNPIHVEGFTDDQPIRTAQYPTNWELSSARSA 197
              GSG   P      +I +V  +L+     I V G TDD  I    Y +NW+LSS R+ 
Sbjct: 195 FSSGSGFLQPRFKP--VIRRVGELLKDVPGIITVSGHTDDMNISNELYSSNWDLSSKRAV 252

Query: 198 SIV-RMLAMQGVNPGRLASVGYGEFQPVANNATAEGRARNRRVVLVVSR 245
           ++   ++ + G +  R+  VG     P+  N +A  RARNRRV + + +
Sbjct: 253 AVAHELVRVPGFDQQRMKVVGMASTAPLVPNDSAANRARNRRVEIAIEQ 301