Pairwise Alignments

Query, 297 a.a., Flagellar motor rotation protein MotB from Pseudomonas fluorescens FW300-N1B4

Subject, 224 a.a., OmpA/MotB domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 72.8 bits (177), Expect = 7e-18
 Identities = 42/130 (32%), Positives = 74/130 (56%), Gaps = 5/130 (3%)

Query: 116 ISSNQMTVRGNELWVEIELNSSLLFGSGDAMPSDIAFNIIDKVAAILRPFDNP-IHVEGF 174
           + S  ++V  N   + + + + + FG   ++ S  A N++D VA + + +D   ++V GF
Sbjct: 94  LQSTGVSVTRNGDNIILNMPNEVTFGVDQSVLSSRAKNVLDSVALVAKEYDETMLNVMGF 153

Query: 175 TDDQPIRTAQYPTNWELSSARSASIVRMLAMQGVNPGRLASVGYGEFQPVANNATAEGRA 234
           TD     +     N  LS  R+A +   L  + +   R++SVG GE +P+A+N+T +GRA
Sbjct: 154 TDS----SGSESYNLRLSQVRAAEVANYLMSREIKSQRISSVGMGESRPIADNSTQQGRA 209

Query: 235 RNRRVVLVVS 244
           +NRRV +V+S
Sbjct: 210 QNRRVEIVLS 219