Pairwise Alignments

Query, 297 a.a., Flagellar motor rotation protein MotB from Pseudomonas fluorescens FW300-N1B4

Subject, 648 a.a., OmpA/MotB domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 80.5 bits (197), Expect = 1e-19
 Identities = 63/178 (35%), Positives = 90/178 (50%), Gaps = 24/178 (13%)

Query: 83  VKDSEQIDAGIAQAANDPLKSIADDI----SAAFGDLISSNQMTVRGNELWVEIE----- 133
           V   ++  A + +A    L++ A D+    S  FG+L       + G +  V IE     
Sbjct: 471 VAAEQRARADLEEAERRRLEAEAQDLARYRSEFFGEL-----RDLLGGQEGVRIEGDRFV 525

Query: 134 LNSSLLFGSGDAMPSDIAFNIIDKVAAILRP--------FDNPIHVEGFTDDQPIRTA-Q 184
            +SS+LF +G+   S      + KVA ILR          D  + V+G TD+ P+    +
Sbjct: 526 FSSSVLFDTGEVALSPQGQAEVAKVAGILRSVADRIPEGIDWVLRVDGHTDNVPVTGGGK 585

Query: 185 YPTNWELSSARSASIVRMLAM-QGVNPGRLASVGYGEFQPVANNATAEGRARNRRVVL 241
           Y  NWELS  R+ S+ R L   QG+ P RLA  G+GE+QPV+   T EGRA NRR+ L
Sbjct: 586 YADNWELSQGRALSVARFLIEDQGIPPDRLAPTGFGEYQPVSLEDTPEGRALNRRIEL 643