Pairwise Alignments

Query, 453 a.a., Flagellar hook-length control protein FliK from Pseudomonas fluorescens FW300-N1B4

Subject, 413 a.a., Flagellar hook-length control protein from Pseudomonas stutzeri RCH2

 Score =  190 bits (483), Expect = 6e-53
 Identities = 153/459 (33%), Positives = 224/459 (48%), Gaps = 52/459 (11%)

Query: 1   MPVTPNILLQAATTAKAQAASANAPALTAEPGDK-ASSFAQVYANQAQNKPSAMADGSAK 59
           M V+P++LL+  +       S  AP    E  D  +SSF+ VYA + Q KP         
Sbjct: 1   MAVSPDLLLKTPSVDSRAKTSTKAPDAPREGRDSGSSSFSDVYAKERQTKP-VERQARND 59

Query: 60  PARDKVSDSVGKKDVSNDKSAAPEPTVADSGKSLPADKPAQADGKTACDDAS--DTAEAS 117
            +RDK  D   ++ V+ D +   +P VA+SG  LP+D P++    T  D           
Sbjct: 60  TSRDKPVDDKSRQAVA-DAAGDGKPAVAESGNPLPSDAPSEELPDTELDPLLLLGLGGQF 118

Query: 118 TPVADTAPVDPALDPALVVQPVLPAPVPETPTVVATAQSQVEAPVAVVVTPAAAQTVATI 177
            P A+  PV       L+        +P TP +++    QV    ++    AA +    +
Sbjct: 119 VPQAEAQPVTQVPGETLLTG------LPLTPGLISGEAEQVADEPSITGLQAADEMPVGV 172

Query: 178 DPDFDPEADPLDALPAVRMAMEQGGHVSPASQAQPKAAPISAQVDGEPTSAQNFATGMAG 237
                    P+  LP            +P   AQ KA     + D   +S       +AG
Sbjct: 173 QK-------PVQQLP------------NPLVDAQAKA-----EADDGFSSVL-----LAG 203

Query: 238 MLDVQADQDSTSQGGEKAFSGLIDDGLKDLKSASSDTRVDDFANRLA-ALTQAATPKTAN 296
                 ++      G+     +  DG K+ +++S+        N L+ A+TQ        
Sbjct: 204 KESADGEEPELELAGKDLLDAV--DGPKESRASSASELASSRLNPLSQAITQQVQQAQRP 261

Query: 297 ALPVNQPIAMHQSGWTEEVVNRVMYLSSANLKAADIQLQPAELGRLDIRLNMVPDQQTQV 356
            L   QP+ M Q GW+E VV+RVM+LSS NLK+A+IQL PAELGR+++R+++  D Q QV
Sbjct: 262 GLVPGQPVQMQQPGWSEAVVDRVMWLSSQNLKSAEIQLDPAELGRMEVRIDLTKD-QAQV 320

Query: 357 TFMSAHPSVREALDGQMHRLRDMFAQQGMGQVDVNVSDQS--RGWQGQGQEQAQQGQGGR 414
           TF+S H  VR+AL+GQM RLR+MF QQGM  +DVNVSDQS  RGWQG G +     +GG 
Sbjct: 321 TFLSPHAGVRDALEGQMQRLREMFTQQGMNLMDVNVSDQSLARGWQG-GTDGGGSSRGG- 378

Query: 415 ANANGGRLDSADEELPATVAEVAANTTSVIGTSAVDYYA 453
           ++A G   ++ D E+   V+E+A N  S      VD+YA
Sbjct: 379 SSAEG---EADDGEVQLGVSEIAGN-RSAGNRGLVDFYA 413