Pairwise Alignments

Query, 453 a.a., Flagellar hook-length control protein FliK from Pseudomonas fluorescens FW300-N1B4

Subject, 674 a.a., flagellar hook-length control protein FliK from Vibrio cholerae E7946 ATCC 55056

 Score =  102 bits (253), Expect = 5e-26
 Identities = 119/416 (28%), Positives = 174/416 (41%), Gaps = 77/416 (18%)

Query: 19  AASANAPALTAEPGDKAS----SFAQVYANQAQNKPSAMADGSAKPARDKVSDSVGKKDV 74
           A+ A A  + AEP + A        Q +AN A     A+A  SA+ +    + S   K  
Sbjct: 285 ASLAAANTVHAEPVEGAMLEGMPLTQTFANTA-----ALASPSAEVSEALAASSQALK-- 337

Query: 75  SNDKSAAPEPTVADSGKSLPADKPAQADGKTACDDASDTAEASTPVADTAPVDPALDPAL 134
                A P    A +  S+ AD     +G      A++T +   P     P D  L    
Sbjct: 338 -----ATPLTQSALNPASIMAD-----EGLNQSTSATETGKVVIPWGTQMPTDNEL---A 384

Query: 135 VVQPVLPAPVPETPTVVATAQSQVEAPVAVVVTPA---AAQTVATIDPDFDPEADPLDAL 191
            + P L A + E     A   + +   VA  +TPA   A QT  T  P     A P+D  
Sbjct: 385 ALTPELKAMLEEGGKAKAPVPNALAQSVAQGLTPAHLAAQQTGTTALPMNPTAATPIDIA 444

Query: 192 PAVRMAMEQGGHVSPASQAQPKAAPISAQVDGEPTSAQNFATGMAGMLDVQADQDSTSQG 251
                 +     ++PA+   P+ A  SA +                           +  
Sbjct: 445 ALAPQTVAVNPMLNPAATVNPELAASSAML---------------------------AAL 477

Query: 252 GEKAFSGLIDDGLKDLKSASSDTRVDDFANRLAALTQAATPKTANALPVNQ--------- 302
           G +A +G       D + A S++  +D A ++AA   AA   TA    +N+         
Sbjct: 478 GGRALAG------SDERRAVSESGQEDLAQQIAA---AAGQGTAQNQALNRAESQLVQTN 528

Query: 303 --PIAMHQSGWTEEVVNRVMYLSSANLKAADIQLQPAELGRLDIRLNMVPDQQTQVTFMS 360
             P+ +++    +++  RV  + S NLK  DI+L P ELGR+ IR+NM  D  T V F  
Sbjct: 529 ATPVPLNKEMAADQLAERVQMMMSKNLKNIDIRLDPPELGRMHIRMNMQGDGAT-VHFTV 587

Query: 361 AHPSVREALDGQMHRLRDMFAQQGMGQVDVNVSDQSRGWQGQ--GQEQAQQGQGGR 414
           A+   REAL+  M RLR+M AQQG+   D +V  QS G Q +  GQEQ+  GQ  R
Sbjct: 588 ANQHAREALEQTMPRLREMLAQQGVQLGDTSVQQQSAGQQQRYTGQEQSGFGQSAR 643