Pairwise Alignments

Query, 453 a.a., Flagellar hook-length control protein FliK from Pseudomonas fluorescens FW300-N1B4

Subject, 593 a.a., flagellar hook-length control protein FliK (RefSeq) from Shewanella amazonensis SB2B

 Score = 67.4 bits (163), Expect = 1e-15
 Identities = 106/432 (24%), Positives = 163/432 (37%), Gaps = 98/432 (22%)

Query: 92  SLPADKPAQADGKTACDDASDTAEASTPVADTAPVDPALDPALVVQPVLPAPVP------ 145
           +L AD P+  DG           +A  P ADT   D A   AL++Q +L APV       
Sbjct: 190 TLMADNPSLKDGLALL------LQADAPGADTDN-DAANQVALLMQTLLGAPVQQNVSAD 242

Query: 146 ---ETPTVVATAQSQVEAPVAVVVTPAAAQT----VATIDPDFDPEADPL---------- 188
              E P  +    S  EA +      A  QT    VA      DPE D            
Sbjct: 243 NPSEHPADIRLGGSSAEAALNKAANLAPEQTRGLDVAMARVGGDPEVDNAAVTGKAMAGS 302

Query: 189 ------------------DALPAVRMAMEQGGHVSPASQAQPKAAPISAQVDGEPTSAQN 230
                             DA  A   A+E    ++P + A  +          E  S   
Sbjct: 303 TEAARTETFRAETDTKKGDAGQAFTRALEATRGLAPDAVAGKELGDFG----NEGVSGIT 358

Query: 231 FATGMAGMLDVQADQDSTSQGGEK-------------AFSGLIDDGLK------DLKSAS 271
              G+  +  V AD  S     ++             A     D  LK      D K  +
Sbjct: 359 PQAGVEALTKVSADASSKVNAEQQDTVKEALSVKSLEAAGRAADSNLKAELPAIDAKGQA 418

Query: 272 SDTRVDDFA----------NRLAALTQAATPKTANALPVNQPIAMHQSGWTEEVVNRVMY 321
           S   V D            +   A+T +   +TA   P+ QP  + +  +   +  +++ 
Sbjct: 419 SIESVADIKPPSPLQTSRIHETPAMTMSL--RTAQERPMTQPDMVAR--FAPVMHTQLIA 474

Query: 322 LSSANLKAADIQLQPAELGRLDIRLNMVPDQQTQVTFMSAHPSVREALDGQMHRLRDMFA 381
           +    ++ A+I+L P ELG + +R+  V   +TQV F       ++ ++  M RLR++ A
Sbjct: 475 MVRDGIQQAEIRLDPPELGSMMVRIQ-VQGNETQVQFHVNAQQTKDVVEQAMPRLRELLA 533

Query: 382 QQGMGQVDVNVSDQSRGWQGQGQEQAQQGQGGRANANGGRLDSADEELPATVAEVAANTT 441
           QQGM   D  VS + RG          +G+G +    G +  + D E PA   +++AN T
Sbjct: 534 QQGMELTDGQVSHERRG----------EGRGRQDTPEGSQFVTMD-EFPAEELQLSANQT 582

Query: 442 SVIGTSAVDYYA 453
           +   +S +DYYA
Sbjct: 583 TSY-SSGIDYYA 593