Pairwise Alignments

Query, 453 a.a., Flagellar hook-length control protein FliK from Pseudomonas fluorescens FW300-N1B4

Subject, 568 a.a., flagellar hook-length control protein (RefSeq) from Shewanella loihica PV-4

 Score = 64.3 bits (155), Expect = 1e-14
 Identities = 54/193 (27%), Positives = 94/193 (48%), Gaps = 17/193 (8%)

Query: 266 DLKSASSDTRVDDFANR--LAALTQAATPKTANALPVNQPIAMHQS---GWTEEVVNRVM 320
           ++  A++DT+++  + +    A  +       +  P  +P+   Q     ++  +  +++
Sbjct: 388 EMPDAAADTKLNALSLQGLQGARNEVLPQYQVSIKPQGEPVTQMQEMIHKFSPVMRQQLV 447

Query: 321 YLSSANLKAADIQLQPAELGRLDIRLNMVPDQQTQVTFMSAHPSVREALDGQMHRLRDMF 380
            + S  ++ A+I+L P ELG + +R+ +  DQ TQV F       R+ ++  + RLR++ 
Sbjct: 448 AMVSQGVQQAEIRLDPPELGHMMVRVQVQGDQ-TQVQFHVTQTQTRDLVEQAIPRLRELL 506

Query: 381 AQQGMGQVDVNVSDQSRGWQGQGQEQAQQGQGGRANANGGRLDSADEELPATVAEVAANT 440
           A+QGM   D NVS      QG G+EQ   G+ G    +G  L   DE        V+ N 
Sbjct: 507 AEQGMQLTDSNVS------QG-GKEQGGNGEQGEGVGHG--LSEMDEISAEESLLVSNNA 557

Query: 441 TSVIGTSAVDYYA 453
           TS    S +DYYA
Sbjct: 558 TSY--RSGIDYYA 568



 Score = 28.1 bits (61), Expect = 8e-04
 Identities = 33/112 (29%), Positives = 47/112 (41%), Gaps = 11/112 (9%)

Query: 14  TAKAQAASANAPALTAEPGDKASSFAQVYANQA---QNKPSAMADGSAKPARDKVSDSVG 70
           +AKA  + +N  A   EP   A   +Q   NQ    QN+ S     SA  A   V  +V 
Sbjct: 259 SAKASQSQSNLAATQTEPSQGAGGASQAGLNQVGLNQNEISQTGLTSANNA-SGVESAVN 317

Query: 71  KKDVSNDKSAAPEPTVADSGKSLPADKPAQADGKTACDDASDTAEASTPVAD 122
           +K V   K+   E  V +S       +   AD K A + A + A  +T  A+
Sbjct: 318 EKGV---KAILGESKVGES----KFGEAKLADAKLAAEQAQNGALKTTSGAE 362