Pairwise Alignments

Query, 101 a.a., Anti-sigma F factor antagonist (spoIIAA-2); Anti-sigma B factor antagonist RsbV from Pseudomonas fluorescens FW300-N1B4

Subject, 94 a.a., SpoIIAA family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 53.5 bits (127), Expect = 6e-13
 Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 2/88 (2%)

Query: 15  TISIEGRFDFGRHQEFRESYERL--SRTPDSIVVDLKKATYLDSSALGMLLLLRDHAGGD 72
           TI +  RFDF  H+ F   Y+++   +  + IV+D  +  YLDSSALGM++LL   A   
Sbjct: 6   TIVLPERFDFDYHKAFTSDYQKILSLKEVNHIVLDFSRVLYLDSSALGMMVLLHRRAQER 65

Query: 73  NSDIRVVNSSTDVKKILAISNFDKLFDI 100
                V       ++IL I+N  K++ I
Sbjct: 66  GISTSVKGMHGQAEEILNIANMQKIYII 93