Pairwise Alignments

Query, 269 a.a., Flagellar assembly protein FliH from Pseudomonas fluorescens FW300-N1B4

Subject, 339 a.a., flagellar assembly protein FliH (RefSeq) from Shewanella loihica PV-4

 Score =  100 bits (249), Expect = 4e-26
 Identities = 79/249 (31%), Positives = 108/249 (43%), Gaps = 28/249 (11%)

Query: 21  FDIWSLPSFDPFVPEPEPEP--EPEPPEMEEVPLEEVQPLTLEELESIRQEAYNEGFAVG 78
           F  W LP   P V EP+        P +  +   E V P TLEE+ESIR EA  EGFA G
Sbjct: 22  FSHWQLPDVTPVVHEPKENMFGRIAPQKAAKAVDEPVMPPTLEEIESIRAEAEAEGFAQG 81

Query: 79  EK--------------------EGFHSTTLKVRQEAEVALTAKIAGLEQLMANLFEPIAE 118
           ++                    EG+     +  +   V     IA  E LM  L  P++ 
Sbjct: 82  QEAGMAKGLEEGRLKGLEQGHEEGYRQGQAQGMEAGLVEAKQTIAHFEALMQQLSMPLSL 141

Query: 119 QDTQIEKSLVDLVQHITKQVIQRELAIDSTQIEHVMREALKLLPLGVGNVRLYINPQDFE 178
            DT+IE++LV L   + K VI  EL      I   +R+ +  LPL      L ++P+D  
Sbjct: 142 LDTEIEQALVQLSMTLAKAVIGHELKTHPEHILAALRQGVDALPLKEQGAHLRLHPEDLA 201

Query: 179 QVKALRERHEET---WRIVEDESLLPGGCRVETEHSRIDATIETRVTQVMAKLF---DQL 232
            V+ L E  + T   W +  D +L  G C V    SR+D  +E R+  V  KL     +L
Sbjct: 202 IVERLYESAQLTKNHWELEADPTLSRGECIVSNSRSRVDMGLEHRIKAVFDKLIASEQRL 261

Query: 233 HDQALHPAA 241
             Q L   A
Sbjct: 262 EQQRLQQLA 270