Pairwise Alignments

Query, 269 a.a., Flagellar assembly protein FliH from Pseudomonas fluorescens FW300-N1B4

Subject, 320 a.a., flagellar assembly protein H (RefSeq) from Shewanella sp. ANA-3

 Score = 80.5 bits (197), Expect = 4e-20
 Identities = 61/229 (26%), Positives = 104/229 (45%), Gaps = 27/229 (11%)

Query: 50  VPLEEVQPLTLEELESIRQEAYNEGFAVGEKEGFHSTTLKVRQEA--------------- 94
           V  E + P T+ E+E IR +A  EGF  G+ +G+     + R E                
Sbjct: 57  VAAETIAPPTMAEIEDIRAQAEEEGFNEGKTQGYAEGLEQGRLEGLEQGHTEGLAQGHEQ 116

Query: 95  --EVALT---AKIAGLEQLMANLFEPIAEQDTQIEKSLVDLVQHITKQVIQRELAIDSTQ 149
             E  L    A ++  E L++   +P+   D  IE SL+ L   + K VI  EL     Q
Sbjct: 117 GLEAGLAEAKALVSRFEGLLSQFEKPLQLLDGDIEHSLMTLTMALAKSVIGHELKTHPEQ 176

Query: 150 IEHVMREALKLLPLGVGNVRLYINPQD---FEQVKALRERHEETWRIVEDESLLPGGCRV 206
           I   +R  ++ LP+   +V + ++P D    EQ+ +  + +   W++  D SL  G C +
Sbjct: 177 ILSALRLGVESLPIKEQSVSIRMHPDDVALVEQLYSSTQLNRNQWQLEADPSLNSGDCII 236

Query: 207 ETEHSRIDATIETRVTQVMAKLFDQLHDQALHPAAPDLSLELPIDEKPA 255
            ++ S +D T+ +R+  V    F+ L +Q  H +      +  +DE+ A
Sbjct: 237 SSQRSLVDLTLSSRIDAV----FESLRNQQSHLSHQQQQRQAVLDEENA 281