Pairwise Alignments

Query, 339 a.a., Flagellar motor switch protein FliG from Pseudomonas fluorescens FW300-N1B4

Subject, 345 a.a., flagellar motor switch protein G (RefSeq) from Shewanella amazonensis SB2B

 Score =  395 bits (1016), Expect = e-115
 Identities = 196/338 (57%), Positives = 264/338 (78%)

Query: 2   SDNRAVAAKLTKVDKAAILLLSLGSTDAAQVLRHMGPKEVQRVGVAMAQMGNVHREQVEQ 61
           S++    + L+ V+K AILLLSL   DAA +L+H+ PK+VQ+VG+AMA + +  +E+V  
Sbjct: 8   SESGFKVSNLSGVEKTAILLLSLSEADAASILKHLEPKQVQKVGMAMAALEDFGQEKVIA 67

Query: 62  VMSEFVDIVGDQTSLGVGSDDYVRKMLTQALGEDKANGLIDRILLGGNTSGLDSLKWMEP 121
           V  +F+D +   +S+G  S+++VRK LT ALGEDKA  LI++I++G    GLDSLKWM+ 
Sbjct: 68  VHKQFLDDIQKFSSIGFNSEEFVRKALTAALGEDKAGNLIEQIIMGSGAKGLDSLKWMDA 127

Query: 122 RAVADVIRYEHPQIQAIVVAYLDPDQAGEVLGNFDHKVRLDIILRVSSLNTVQPAALKEL 181
           R VA +I+ EHPQIQ IV++YL+PDQA E+   F    RLD+++R+++L  VQPAAL+EL
Sbjct: 128 RQVATIIQNEHPQIQTIVLSYLEPDQAAEIFSQFPENTRLDLLMRIANLEEVQPAALQEL 187

Query: 182 NQILEKQFSGNSNASRTTLGGIKRAADIMNFLDSSIEGQLMDSIREVDEDLSGQIEDLMF 241
           N I+EKQF+G   A    +GG+K AA+IMN+LD++IE QLM+++RE DE+++ QI+DLMF
Sbjct: 188 NDIMEKQFAGQGGAQAAKMGGLKAAANIMNYLDTAIESQLMETMRETDEEMAQQIQDLMF 247

Query: 242 VFNNLSDVDDRGIQALLREVSSDVLVLALKGSDEGVKEKIFKNMSKRAAELLRDDLEAKG 301
           VF NL DVDDRGIQ LLREV  DVL+ ALKG+DE +K+KI  NMSKRAAELLRDDLEA G
Sbjct: 248 VFENLIDVDDRGIQTLLREVQQDVLMKALKGADEPLKDKILGNMSKRAAELLRDDLEAMG 307

Query: 302 PVRVSDVETAQKEILTIARRMAEAGEIVLGGKGGEEMI 339
           P+R+S+VE AQKEIL+IARR+++AGEI+LGG GGEE I
Sbjct: 308 PIRISEVELAQKEILSIARRLSDAGEIMLGGGGGEEFI 345