Pairwise Alignments

Query, 195 a.a., Flagellar regulatory protein FleQ from Pseudomonas fluorescens FW300-N1B4

Subject, 447 a.a., two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  160 bits (405), Expect = 3e-44
 Identities = 93/192 (48%), Positives = 120/192 (62%), Gaps = 11/192 (5%)

Query: 1   VATTNRDLAAEVTAGRFREDLYYRLSVFPLAWRPLRERTADILPLAERLLAKHVNKMKHA 60
           +AT+NRDL A  T G FREDLYYR++VFPL W  L +R ADILPLA  L+ +H      A
Sbjct: 265 LATSNRDLKAMATKGDFREDLYYRINVFPLTWPALHQRPADILPLARHLVLRHAKAAGLA 324

Query: 61  VA-KLSPEAQVCLIAYPWPGNVRELDNAIQRALILQQGGLIQPQDFCL-AGPVACAPLPP 118
           VA  L  +A   L+ + WPGNVRELDN +QRALILQ G  I  +D  +    V   P   
Sbjct: 325 VAPSLDDQASRRLLGHRWPGNVRELDNVVQRALILQTGDTICAKDIVIDTQDVMLEP--- 381

Query: 119 LASTPTRAVDVEAESAGALGDDLRRREFQMIIDTLRSERGRRKEAAERLGISPRTLRYKL 178
            A    + V+ E      LGD+L+ +E  +I++TL    G RK+ AE+LGIS RTLRYK+
Sbjct: 382 -AFDSEKTVEPE-----GLGDELKAQEHVIILETLNQCNGSRKQVAEKLGISARTLRYKM 435

Query: 179 AQMRDAGMDVEA 190
           A+MRD G+ + A
Sbjct: 436 ARMRDMGIQIPA 447