Pairwise Alignments

Query, 195 a.a., Flagellar regulatory protein FleQ from Pseudomonas fluorescens FW300-N1B4

Subject, 388 a.a., sigma54 specific transcriptional regulator, Fis family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  116 bits (291), Expect = 5e-31
 Identities = 74/215 (34%), Positives = 106/215 (49%), Gaps = 35/215 (16%)

Query: 1   VATTNRDLAAEVTAGRFREDLYYRLSVFPLAWRPLRERTADILPLAERLLAKHVNKMKHA 60
           +A +NR+L   V  GRFR DL++RL+V P++  PLR R  +I+PLA   LA +  K    
Sbjct: 169 IAASNRELPDMVREGRFRADLFFRLNVIPVSLPPLRARREEIVPLARHFLAHYAEKYHRH 228

Query: 61  VAKLSPEAQVCLIAYPWPGNVRELDNAIQRALILQQGGLIQPQDFCL------------- 107
             +  PE +  L  YPWPGNVREL N ++R  +L   G I P+   L             
Sbjct: 229 GLRFRPETEAGLSGYPWPGNVRELKNLVERLALLAPDGDIGPEHLPLELRSAVALGAAGV 288

Query: 108 --AGPVACAPLPPLAS--------------TPTRAVDVEAESAGALGDDL------RRRE 145
             AG  A   +  +AS               P   + + A     +G+DL      R  E
Sbjct: 289 GGAGGYAGGGVSGVASGGAGNGNGNGNGGGMPGGDLAIHAVHPAGMGEDLSLDVARREAE 348

Query: 146 FQMIIDTLRSERGRRKEAAERLGISPRTLRYKLAQ 180
            ++I+  +R+  G + EAA  LG+SPRTLRYK ++
Sbjct: 349 VRVILKAMRASGGNKGEAARLLGVSPRTLRYKFSE 383