Pairwise Alignments

Query, 195 a.a., Flagellar regulatory protein FleQ from Pseudomonas fluorescens FW300-N1B4

Subject, 446 a.a., two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  155 bits (393), Expect = 8e-43
 Identities = 88/190 (46%), Positives = 116/190 (61%), Gaps = 12/190 (6%)

Query: 1   VATTNRDLAAEVTAGRFREDLYYRLSVFPLAWRPLRERTADILPLAERLLAKHVNKMKHA 60
           +AT+NRDL A V AG+FREDLYYR++VFPL W  L +R ADILPLA  LL KH   +   
Sbjct: 265 LATSNRDLKAVVAAGQFREDLYYRINVFPLTWPALNQRPADILPLARHLLTKHAKALSII 324

Query: 61  -VAKLSPEAQVCLIAYPWPGNVRELDNAIQRALILQQGGLIQPQDFCLAGPVACAPLPPL 119
            V +    A   L+ + WPGNVRELDN +QRALIL+ G +I   D  +            
Sbjct: 325 DVPEFDEAACRRLLGHRWPGNVRELDNVVQRALILRSGTVITANDIII----------DA 374

Query: 120 ASTPTRAVDVE-AESAGALGDDLRRREFQMIIDTLRSERGRRKEAAERLGISPRTLRYKL 178
              P  + D E       LG++L+ +E  +I++TL   +G RK  AE+LGIS RTLRYK+
Sbjct: 375 QDVPLSSDDAEYCSEPEGLGEELKAQEHVIILETLAQCQGSRKLVAEKLGISARTLRYKM 434

Query: 179 AQMRDAGMDV 188
           A+MRD G+ +
Sbjct: 435 ARMRDMGIQL 444