Pairwise Alignments

Query, 246 a.a., Flagellar basal-body rod protein FlgF from Pseudomonas fluorescens FW300-N1B4

Subject, 249 a.a., flagellar basal-body rod protein FlgF from Vibrio cholerae E7946 ATCC 55056

 Score =  229 bits (583), Expect = 5e-65
 Identities = 117/249 (46%), Positives = 172/249 (69%), Gaps = 3/249 (1%)

Query: 1   VDKYLYVAMTGASQNALAQKAHANNLANISTNGFQKDLEQARSMPVFGDSFPARAFAMSE 60
           +D+ L++AM+GA QN  A +  ANNLAN+ST GF+ DL QARSM  +G+  P+R F+M+E
Sbjct: 1   MDRALFLAMSGAKQNMQAMQLRANNLANVSTTGFRADLAQARSMQAYGEGLPSRVFSMTE 60

Query: 61  RPATDFSPGALVQTGRDLDVAVQGNGWIAVQNPDGGESYVRTGSLNVDALGVLRAGNGMP 120
           RP  +F+ G+++ TGRDLD+ +QG+GWI+V +  G E   R G+L +D  G+L  GNG P
Sbjct: 61  RPGHNFAQGSVITTGRDLDITIQGDGWISVLDKTGKEGLTRNGNLRIDETGLLLNGNGHP 120

Query: 121 VVG-NGGPIAVP-PEQQIEVGEDGTISIRAMGEGPRVMAEVDRIKLVNPDFKNMTKGLDG 178
           V+G  G PI +P P  ++E+G DGTIS+R  G     M  VDRIKLV  + +++ K ++G
Sbjct: 121 VLGETGAPITLPVPLNKVEIGGDGTISVRPQGAPADAMEVVDRIKLVRLNDQSLFKDVNG 180

Query: 179 SIHTKD-GKPAQADANVKLVSGFLESSNVNAVEEMTSVLALAKQFELHIKMMNTAKDDDQ 237
                D     +ADA+VK+++G LE SNVNA+ EMTS++ L +QFE+ +KMM+TA++ D+
Sbjct: 181 LFRATDPNTQFEADASVKILTGALEGSNVNAIGEMTSLIDLQRQFEMQVKMMSTAEEMDK 240

Query: 238 AMARVLQIS 246
           A   +L+ S
Sbjct: 241 ASDSLLRSS 249