Pairwise Alignments

Query, 246 a.a., Flagellar basal-body rod protein FlgF from Pseudomonas fluorescens FW300-N1B4

Subject, 247 a.a., flagellar basal body rod protein FlgF (RefSeq) from Shewanella loihica PV-4

 Score =  259 bits (663), Expect = 3e-74
 Identities = 129/247 (52%), Positives = 177/247 (71%), Gaps = 1/247 (0%)

Query: 1   VDKYLYVAMTGASQNALAQKAHANNLANISTNGFQKDLEQARSMPVFGDSFPARAFAMSE 60
           +DK LYVAM+GA QN  +    ANNLAN +T+GF+ DLEQARSM  FG+  P R F+M+E
Sbjct: 1   MDKLLYVAMSGAKQNMNSLAVRANNLANANTDGFKSDLEQARSMQAFGEGLPTRVFSMTE 60

Query: 61  RPATDFSPGALVQTGRDLDVAVQGNGWIAVQNPDGGESYVRTGSLNVDALGVLRAGNGMP 120
            P+ +F+ G +  TGRDLD+AV+G+GWIAVQ  DGGE+Y R+GSL+ D  G+LR   G P
Sbjct: 61  NPSANFAAGPIKTTGRDLDIAVKGDGWIAVQAVDGGEAYTRSGSLSFDTSGLLRNDRGNP 120

Query: 121 VVGNGGPIAVP-PEQQIEVGEDGTISIRAMGEGPRVMAEVDRIKLVNPDFKNMTKGLDGS 179
           V+G+ GPI +P P +++E+ +DGTIS+R +G    V+ EV RIKLVNP  +N+ +G DG 
Sbjct: 121 VMGDAGPIVLPLPIEKVEIAQDGTISVRPLGSTAEVIEEVGRIKLVNPGNQNLMRGEDGL 180

Query: 180 IHTKDGKPAQADANVKLVSGFLESSNVNAVEEMTSVLALAKQFELHIKMMNTAKDDDQAM 239
                G  A AD NV + SG +E SNVNAV+EM S++ L +QFE+ +KMM TA++ DQA 
Sbjct: 181 FRQLSGVNAPADPNVAVESGAIEGSNVNAVDEMVSLIDLQRQFEMQVKMMKTAEEMDQAS 240

Query: 240 ARVLQIS 246
           + +++IS
Sbjct: 241 SSLMRIS 247