Pairwise Alignments

Query, 246 a.a., Flagellar basal-body rod protein FlgF from Pseudomonas fluorescens FW300-N1B4

Subject, 250 a.a., flagellar basal-body rod FlgF from Marinobacter adhaerens HP15

 Score =  282 bits (722), Expect = 4e-81
 Identities = 141/249 (56%), Positives = 185/249 (74%), Gaps = 6/249 (2%)

Query: 1   VDKYLYVAMTGASQNALAQKAHANNLANISTNGFQKDLEQARSMPVFGDSFPARAFAMSE 60
           +DK LY+ M+GA QN LAQ+AHANNLAN+ST GF+KD  QARSMPV+G+  P RA+AM+E
Sbjct: 1   MDKALYIGMSGAKQNMLAQQAHANNLANVSTTGFKKDFAQARSMPVYGEHHPTRAYAMTE 60

Query: 61  RPATDFSPGALVQTGRDLDVAVQGNGWIAVQNPDGGESYVRTGSLNVDALGVLRAGNGMP 120
           RP TD S GAL++TGR LDVAV+G GW+A+QN  G E + R+GSL VD  G++R  NG  
Sbjct: 61  RPGTDLSAGALMETGRKLDVAVEGEGWLAIQNDQGEEVFTRSGSLQVDVNGLVRLANGEL 120

Query: 121 VVGNGGPIAVPPEQQIEVGEDGTISIRAMGEGPRVMAEVDRIKLVNPDFKNMTKGLDGSI 180
           V+GNGGP+A+PP   +E+G DGT+SI  +G  P  + EVDR+KLV+P  + + KGLDG +
Sbjct: 121 VLGNGGPVALPPFDNVEIGADGTVSIVPVGGPPDQLVEVDRLKLVSPPPEALEKGLDGHM 180

Query: 181 HTK-----DGKPAQADANVKLVSGFLESSNVNAVEEMTSVLALAKQFELHIKMMNTAKDD 235
             K     DG P   DAN ++ SGFLESSNVNAVEEM S L L++Q+E+ +K+M TA ++
Sbjct: 181 RRKPDQALDG-PEPPDANQRVASGFLESSNVNAVEEMISNLQLSRQYEMQVKVMTTANEN 239

Query: 236 DQAMARVLQ 244
            +A AR+LQ
Sbjct: 240 SEATARLLQ 248