Pairwise Alignments

Query, 246 a.a., Flagellar basal-body rod protein FlgF from Pseudomonas fluorescens FW300-N1B4

Subject, 247 a.a., flagellar basal body rod protein FlgF (RefSeq) from Shewanella sp. ANA-3

 Score =  241 bits (615), Expect = 1e-68
 Identities = 119/247 (48%), Positives = 168/247 (68%), Gaps = 1/247 (0%)

Query: 1   VDKYLYVAMTGASQNALAQKAHANNLANISTNGFQKDLEQARSMPVFGDSFPARAFAMSE 60
           +DK+LY++M+GA QN       ANNLAN +T+GF+ D+ QARSM  FG+  P R FAM E
Sbjct: 1   MDKFLYISMSGAKQNMNELALRANNLANANTDGFKSDMAQARSMQAFGEGLPTRVFAMVE 60

Query: 61  RPATDFSPGALVQTGRDLDVAVQGNGWIAVQNPDGGESYVRTGSLNVDALGVLRAGNGMP 120
            P+ +F  G +  TGRDLDVA++G+GW AVQ  DG E+Y R+GSL+ D+ G+L    G P
Sbjct: 61  TPSANFRSGPIKSTGRDLDVAIKGDGWFAVQAQDGSEAYTRSGSLSFDSTGLLHNDRGNP 120

Query: 121 VVGNGGPIAVP-PEQQIEVGEDGTISIRAMGEGPRVMAEVDRIKLVNPDFKNMTKGLDGS 179
           V+G+ GPI +P P +++ + +DG IS+R  G    V+ EV R+KLVNP    M +G DG 
Sbjct: 121 VMGDAGPIVLPLPIEKVTISQDGIISVRPQGATTEVVEEVGRLKLVNPGNAQMMRGEDGL 180

Query: 180 IHTKDGKPAQADANVKLVSGFLESSNVNAVEEMTSVLALAKQFELHIKMMNTAKDDDQAM 239
                G PA AD +V + SG +E SNVN V+EM S++ L +QFEL +KMM TA+++D+A 
Sbjct: 181 FRLVSGDPAPADPSVFVESGAVEGSNVNPVDEMVSLIDLQRQFELQVKMMKTAEENDRAS 240

Query: 240 ARVLQIS 246
           + +++IS
Sbjct: 241 SSLMRIS 247