Pairwise Alignments

Query, 252 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N1B4

Subject, 249 a.a., helix-turn-helix transcriptional regulator from Pseudomonas fluorescens SBW25-INTG

 Score =  351 bits (900), Expect = e-102
 Identities = 179/249 (71%), Positives = 202/249 (81%)

Query: 1   MRPILTLRQYTHDLIVHSHDHAQLVFGLSGALDFEVEGHGSQVVQQSFVVVPSGAHHACD 60
           M P LTLR Y    I HSHDHAQLVFGLSG LD EV+G GSQV + S +V+P  AHHAC 
Sbjct: 1   MSPTLTLRHYLEAPIAHSHDHAQLVFGLSGHLDLEVDGRGSQVRESSVMVLPFSAHHACG 60

Query: 61  SAHGSRCLVLDVPSDQWVSQSLGDHAEASRRLLDNAGRLSLDAGQSQLVSWLAGSQISDP 120
           S  GSRCLVLDVP++ WV QSLG HA+ASRRLLD   RL+LD+ Q QLV WLA S + DP
Sbjct: 61  SRDGSRCLVLDVPTEHWVLQSLGTHADASRRLLDQPARLALDSRQHQLVQWLAQSPVDDP 120

Query: 121 LIAQQGAVLLLASLNNTKPDSVGGRRLPYAALNAHIDQYAAYPLQVADLARIAGLSSARL 180
           LIAQQGAVLLLASLN+     + GRRLPYAA NAHI+++ A+PLQVADLARIA LS ARL
Sbjct: 121 LIAQQGAVLLLASLNHPSAQPLPGRRLPYAAFNAHIERHLAHPLQVADLARIADLSVARL 180

Query: 181 HARFVAECGQTPMDYIRSRRLHIAVGLLRDSALPIGEIACRVGYSSQSAFAAAVLREFGA 240
           HARF+AECGQTPMDYIRSRRLH+A+ LLR + LP+GEIA RVGY+SQSAFAAA+LREFGA
Sbjct: 181 HARFMAECGQTPMDYIRSRRLHMALDLLRQTPLPVGEIADRVGYTSQSAFAAAMLREFGA 240

Query: 241 SPGKLRREA 249
           SPG LRR A
Sbjct: 241 SPGALRRNA 249