Pairwise Alignments

Query, 297 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Pseudomonas fluorescens FW300-N1B4

Subject, 305 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  100 bits (250), Expect = 3e-26
 Identities = 77/270 (28%), Positives = 126/270 (46%), Gaps = 6/270 (2%)

Query: 14  ALMFGLTGVFGKLAAASPAIIVFGRAAFAVLALAFFARFASGTRWQKLDAVDLRRLLLSG 73
           A++ G  G   + A    +II F R       L  +   A+G   Q L     +R L +G
Sbjct: 30  AILMGTIGALARTANLEASIITFYRLLIGAACLIAYM-LATGKARQILHRPG-KRHLFNG 87

Query: 74  LLLMGHWVSFFIAVKVAGVAIATLGFASFPAFTVVLEGLIFRERIRANEILLVVLVSIGL 133
            +L G  V +  ++    +A A +     P  + +    +F ER+   ++L + +  IG+
Sbjct: 88  AMLAGFMVFYVQSIGYINMANAVMLIYLAPLVSAIGAHFLFHERLTRQDLLAIGIALIGV 147

Query: 134 VLVTPDFDLASGATT---GLLWAVASGLLFALLSLTNRASSGRIPPVQAALCQNVVVAIC 190
           V + P  +  +G+T    G  +A+ + L ++   L NR  +    P Q+ L Q    A+C
Sbjct: 148 VAILPSLESLTGSTAELKGYGFALLALLSYSGFMLINRRPASA-SPYQSTLIQLSFGALC 206

Query: 191 LLPVAVPQLSEVRAIDWLWIGLLGVFCTGVAHSLFVASLAVIKARTASVVFALEPVYGIT 250
           LLP A+ Q        W W+ L+GVF   +A    V +L V+ A T   +  +EPV  + 
Sbjct: 207 LLPFALHQAVMPSLTQWFWLALIGVFPGFLAILFAVKALRVLPAATFGTLAYIEPVTVVI 266

Query: 251 LAWLLFDENPTLRMLIGGALIIVAIVVSSR 280
           L W LF E+ T   L+G  LII A ++ +R
Sbjct: 267 LGWSLFAEHLTPMQLMGCGLIICAGLIQTR 296