Pairwise Alignments

Query, 297 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Pseudomonas fluorescens FW300-N1B4

Subject, 296 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  147 bits (371), Expect = 3e-40
 Identities = 91/288 (31%), Positives = 151/288 (52%), Gaps = 1/288 (0%)

Query: 4   RTALGALHIGALMFGLTGVFGKLAAASPAIIVFGRAAFAVLALAFFARFASGTRWQKLDA 63
           R+ L  LH+  L+FG T +F KL   S   I   R   A LALA   +  SG   +    
Sbjct: 8   RSGLIELHLAVLLFGGTALFSKLIPLSALDITALRCCIAALALALLVK-VSGKHLRLNRG 66

Query: 64  VDLRRLLLSGLLLMGHWVSFFIAVKVAGVAIATLGFASFPAFTVVLEGLIFRERIRANEI 123
            D    L  G+++  HWV++F A++++ VAI  + F ++P  TV++E     +R+   +I
Sbjct: 67  KDYGIALGLGIIVSLHWVTYFAAMQLSSVAIGMIAFFTYPVMTVLVEPFFTGKRLELADI 126

Query: 124 LLVVLVSIGLVLVTPDFDLASGATTGLLWAVASGLLFALLSLTNRASSGRIPPVQAALCQ 183
           +  + V +G+ L+ P+ +L +  T G++  V S  LF   +L ++         QA   Q
Sbjct: 127 ISGICVLLGVSLLIPEANLGNDVTLGIIIGVLSAALFTARNLLHKRYFASYSGAQAMYYQ 186

Query: 184 NVVVAICLLPVAVPQLSEVRAIDWLWIGLLGVFCTGVAHSLFVASLAVIKARTASVVFAL 243
             V A+ LLP      S ++A  W  + LLG+  T   H+LF ++L  + A+T S+V  L
Sbjct: 187 TGVSALFLLPWLEVDPSAIQANVWWLVILLGIVFTAAPHALFTSALRQLSAKTVSLVSCL 246

Query: 244 EPVYGITLAWLLFDENPTLRMLIGGALIIVAIVVSSRLSGSSSKSAVA 291
           +P+YG  LA L+  E   ++ LIGGAL++   V  ++ S  ++++  A
Sbjct: 247 QPLYGALLALLILGEGLAMKTLIGGALVVFTAVYETQKSHKANRAQKA 294