Pairwise Alignments

Query, 646 a.a., Membrane bound c-di-GMP receptor LapD from Pseudomonas fluorescens FW300-N1B4

Subject, 1072 a.a., sensory box/GGDEF domain/EAL domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  107 bits (268), Expect = 2e-27
 Identities = 120/441 (27%), Positives = 192/441 (43%), Gaps = 39/441 (8%)

Query: 227  ARSENLRAESYQDALTGLANRRLLDEQLADQLLVSEQS-RDGHLLMLRINDLIGLNQRLG 285
            A+   +R +   DALTGL NR LL E+LA +L   + + R   LL + I++   +N  LG
Sbjct: 621  AKEAQIRYQGMHDALTGLPNRALLLERLAGELKEGQGTGRLCGLLYIDIDNFKTINDSLG 680

Query: 286  GQRTDALIGAVGELLKRLTQPPERRTWLAARNRGGEFSLLT--PGLDNKDAARVASEISA 343
             +  D  I  V E L  L +P +  + L     G E+ +L   PG + ++   VA  I  
Sbjct: 681  HEAGDKFIAEVAEHLTLLIRPEDTLSRLG----GDEYVILVANPG-EEREVVLVAERILH 735

Query: 344  TLENLRLTGASDCMPVA------HLGV---VAYHP--GEPASEVLLRLDQALTQARQHPE 392
                          P+A      H+G+   +A HP  G+   E+L   D A+ +A+   +
Sbjct: 736  HFSQ----------PIALLDRELHVGLSIGIAIHPADGKGPDELLTNADLAMYRAKAQGK 785

Query: 393  RPWVYQAHADTAPNHSQHDWRSWIDEALTEGKMQLYFQPVVQCADTSQVLHHKVLARLLD 452
              +   +        S+ +    +  AL  G++  +FQP V  A T +++  + LAR   
Sbjct: 786  NTYERFSPHLHDRIRSRMELEGRLRHALRHGEIVPHFQPRVDLA-TGRIVGAEALARWTL 844

Query: 453  PQGEAIVAGHFLPWIERLGWSARFDLAMLETTLEYLAANR------WPLALSLSGSTLRD 506
            P G  I  G F+P  E LG        ML ++L +  A          +A++LS    R 
Sbjct: 845  PDGTRISPGEFIPVAEDLGLIFDLGEHMLRSSLAFTRALMDEGLPDITMAVNLSLVQCRH 904

Query: 507  QAQLQQILDLLESLPELAPLLILEIDERQLPPP--EELQRLSHSLLNTGYRIGLQHFGGS 564
               + ++L  L         L LEI E  +       L+RL   L   G  + +  FG  
Sbjct: 905  ADLVGRVLAALRDTGVPPERLELEITESAIMSDVTRTLRRLDR-LAALGITLAVDDFGTG 963

Query: 565  FSQIGNLTQLGLAYLKIDGAYIRGIDEQTDKRLFIEAIFRATNSIDLPLIAEMVETQGEL 624
            +S + +L  + L  LKID +++R +      R     +     ++DL +IAE VET  ++
Sbjct: 964  YSSLYHLKHMPLHTLKIDQSFVRDLPHVAGSRTIALTMLAMARNLDLDVIAEGVETGAQM 1023

Query: 625  EVIRELGLFGVMGRLIGPPEP 645
              +R+ G   V G L  P  P
Sbjct: 1024 HFLRDHGCRVVQGFLFSPAVP 1044