Pairwise Alignments

Query, 230 a.a., Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) from Pseudomonas fluorescens FW300-N1B4

Subject, 1301 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and Response Regulator Receiver modulation (NCBI) from Rhodospirillum rubrum S1H

 Score = 57.8 bits (138), Expect = 1e-12
 Identities = 56/225 (24%), Positives = 92/225 (40%), Gaps = 19/225 (8%)

Query: 15  ASTVHDMKNSLAMLMQAHSQWLARLPDPEQHTPEQGVIDFEFAHLNGMLVQ---LLGLYK 71
           A+  H+++  L +++   +   +R  DP     E+ V+D    +   +L     LL + K
Sbjct: 220 ANVSHELRTPLTLILGPVT---SRQEDPTLAPAEKRVLDMVARNARLLLRHVNDLLDIAK 276

Query: 72  LGVNQMPLQPAYHELDDFIEAQLAAHQEVFASRGIIASYEVDPLSPLGFFDRELIASVLA 131
           L   QM +Q    ++       L+    +   R I  + E  P       D E    VL 
Sbjct: 277 LEAGQMRMQYVRTDVTRLCRFALSHFDSLAEERAIAFTLEA-PAVLWAEIDPEKFRRVLL 335

Query: 132 NCINNAIRYARHA--LLISVSDEAGQLVLTINDDGEGYPAEM----IERQADYVQGINHS 185
           N ++NA ++  +   + +S+ D    ++L ++D+G G P  M     ER      G +  
Sbjct: 336 NLLSNAFKFTPNQGEITVSLIDRGDDVILRVSDNGPGIPESMWTAVFERFRQVDGGSDRR 395

Query: 186 SGSTGLGLYFAGRIAALHQRNGVGGRTEISNGGPLGGGVFSLYLP 230
            G TGLGL        LH     GG   I      GG  F++ LP
Sbjct: 396 HGGTGLGLAIVREFVDLH-----GGEVSIGQASE-GGAAFTVVLP 434