Pairwise Alignments

Query, 232 a.a., ABC transporter for L-Arginine and L-Citrulline, permease component 2 (from data) from Pseudomonas fluorescens FW300-N1B4

Subject, 239 a.a., Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine (NCBI) from Rhodospirillum rubrum S1H

 Score =  197 bits (502), Expect = 1e-55
 Identities = 96/210 (45%), Positives = 144/210 (68%), Gaps = 1/210 (0%)

Query: 14  LYLGGLVTTLKLLALSLFFGLLAALPLGLMRVSKQPVVNMSAWLFTYVIRGTPMLVQLFL 73
           L   GL  TLKL+ L++  G+  A+P  L+RV   P+V    + F +  RGTP+L+Q+ L
Sbjct: 13  LLFEGLPVTLKLVTLAVAIGVFIAIPTALLRVHPSPLVRAFPYAFIFFFRGTPLLIQIAL 72

Query: 74  IYYGLAQFEAVRES-FLWPWLSSATFCACLAFAINTSAYTAEIIAGSLRATPNGEIEAAK 132
           +YYGL+    +RE+  LWP L    +CA +AFA+NT AY+AEI+ G+++A P GE+EAA+
Sbjct: 73  VYYGLSTLPWIRENEVLWPILREPFWCALIAFALNTGAYSAEILRGAIQAIPRGEVEAAR 132

Query: 133 AMGMSRIKMYKRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLIDITGAARTVNAQFY 192
           A GM  + + +RI+LP A +  LP Y NE+I++L+ ++LAS +TL+DITG AR + A++Y
Sbjct: 133 AYGMRGLLIVRRIILPRAFQIGLPAYGNEIILILKGSALASSITLLDITGVARLLYARYY 192

Query: 193 LPFEAYITAGVFYLCLTFILVRLFKMAEHR 222
            P EA++TAGV YL L ++L R  ++ E R
Sbjct: 193 TPVEAFVTAGVIYLILVYLLTRGLRLIERR 222